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April 20, 2010, 19:48 |
Running macros in parallel in batch mode
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#1 |
Member
John
Join Date: Aug 2009
Posts: 92
Rep Power: 17 |
Hi,
I'm trying to run a simulation with a macro, with 4 cores on a local machine, in batch mode using the following: starccm+ -np 4 -batch file.sim file.java and I get the following error: Warning : CPU Timer not running Warning : Wall Timer not running Server Error: There are no regions to solve on It works fine using a single core in serial mode (starccm+ -batch file.sim file.java). Any help would be appreciated. Thanks. |
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April 21, 2010, 13:03 |
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#2 |
Senior Member
Join Date: Mar 2009
Posts: 260
Rep Power: 18 |
Start the server and then start the java file with "a client session".
I had the same problem... never found a other way. |
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April 21, 2010, 14:48 |
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#3 |
Member
John
Join Date: Aug 2009
Posts: 92
Rep Power: 17 |
I'm running starccm in an optimization loop. Starting it without batch mode requires me to end the starccm process after the max iteration has been reached in order for the optimization to proceed to the next run.
Is there an option to end the client and exit starccm? Thanks. |
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April 22, 2010, 03:56 |
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#4 | |
New Member
Matthias Fitl
Join Date: Mar 2009
Location: Austria
Posts: 20
Rep Power: 17 |
Quote:
starccm+ -np 4 -batch file.java -collab -load file.simThis works on our Linux machine since V3.something CU, Matthias |
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April 22, 2010, 14:14 |
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#5 |
Member
John
Join Date: Aug 2009
Posts: 92
Rep Power: 17 |
Hi Matthias, that partly works. All the cores are now available for use (100% CPU usage), but only one core is being used most of the time.
Any ideas? Thanks. |
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April 22, 2010, 15:53 |
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#6 |
Member
John
Join Date: Aug 2009
Posts: 92
Rep Power: 17 |
Just to shed light on what I've been seeing with the following:
starccm+ -np 4 -batch file.java -collab -load file.sim I've attached an iteration time plot. The one on the left is with a single core, roughly 1.2sec/iteration, while the plot on the right is with the above option, running 4 cores, 0.4sec for the fastest iteration, and 28 sec for the slowest, with the entire parallel run taking longer than in the serial case. Any ideas on why this cycling is happening, and a way to control it? Thanks. |
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April 22, 2010, 16:50 |
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#7 |
Member
Vinicius Girardi
Join Date: Mar 2009
Location: Sao Paulo, Brazil
Posts: 80
Rep Power: 17 |
What are your hardware configuration, mesh size and mpi version?
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April 22, 2010, 19:31 |
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#8 |
Member
John
Join Date: Aug 2009
Posts: 92
Rep Power: 17 |
Hi Vinicius,
It's an i7-920 24G RAM, Windows XP64 SP2 mesh size 150,000 cells MPICH2 v1.03. Thanks. |
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April 22, 2010, 22:27 |
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#9 |
Member
Vinicius Girardi
Join Date: Mar 2009
Location: Sao Paulo, Brazil
Posts: 80
Rep Power: 17 |
Maybe you are using too many cores to this small mesh and the parallelization time is higher than the calculation. It's not a rule, but I usually add a core each 250 000 cells.
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April 23, 2010, 13:50 |
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#10 |
Member
John
Join Date: Aug 2009
Posts: 92
Rep Power: 17 |
It seems like MPICH2 uses 1 extra process, so if I request 4 cores, it runs 5 processes and it has trouble distributing 5 processes over 4 cores. It runs well with 3 cores.
So the solution would be to use 1 core less than the total available. Issue has been resolved. Thanks to all who replied. Last edited by nomad; April 23, 2010 at 14:08. Reason: issue resolved |
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April 29, 2010, 01:41 |
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#11 | |
Senior Member
Join Date: Mar 2009
Posts: 260
Rep Power: 18 |
Quote:
But it's sometimes faster with collab? |
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April 29, 2010, 06:00 |
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#12 | |
New Member
Matthias Fitl
Join Date: Mar 2009
Location: Austria
Posts: 20
Rep Power: 17 |
Quote:
On Linux/Bash: alias starccm+="$(which starccm+) -collab" enables this feature constantly. Regards, Matthias |
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April 29, 2010, 07:16 |
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#13 |
Senior Member
Join Date: Mar 2009
Posts: 260
Rep Power: 18 |
I know... but why this difference?
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February 22, 2013, 09:30 |
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#14 |
New Member
Edgar Flores
Join Date: May 2012
Location: Guadalajara, México
Posts: 1
Rep Power: 0 |
Hey nomad,
By any chance you can post .java macro you're using? Thanks in advance Regards |
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Tags |
batch, cpu timer, macros, parallel, wall timer |
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