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February 8, 2019, 07:49 |
parallel
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#1 |
New Member
Join Date: Feb 2019
Posts: 23
Rep Power: 7 |
Hello foamers,
I'm trying to run a case in parallel in a single machine wich has installed centOS 7 with 4 processors. BlockMesh it's okay but when running Code:
mpirun -np 4 interFoam -parallel Code:
The value of the MCA parameter "plm_rsh_agent" was set to a path that could not be found: plm_rsh_agent: ssh : rsh Please either unset the parameter, or check that the path is correct Hope you could help me, Regards. |
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February 10, 2019, 13:08 |
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#2 |
New Member
Join Date: Jan 2014
Posts: 9
Rep Power: 12 |
Hi Dofus,
i had the same problem and ended up using openfoam5-linux. the problem tells that openssh_client is missing. you can install openssh_client in your container like this: Code:
sudo openfoam6-linux apt update apt install openssh_client Code:
[simon@simonpc ~]$ docker ps CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES 50e05c988d80 openfoam/openfoam6-paraview56 "/bin/sh -c '/bin/sh…" 5 minutes ago Up 5 minutes inspiring_stonebraker [simon@simonpc ~]$ docker commit inspiring_stonebraker openfoam/openfoam6-paraview56 It solved that issue for me but still my logs are spammed with a lot of "Read -1, expected XXX" and i run cases either in foam5 or not parallel. i opened a bug report here: https://bugs.openfoam.org/view.php?id=3163 let me know what is your result.. peace |
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February 18, 2019, 12:30 |
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#3 |
New Member
Join Date: Feb 2019
Posts: 23
Rep Power: 7 |
Thank you for your prompt reply. Unfortunately it didn't solve the problem so i ended up installing ubuntu server instead of centOS.
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February 19, 2019, 05:09 |
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#4 |
New Member
Join Date: Jan 2014
Posts: 9
Rep Power: 12 |
Hi Dolfus,
it seems the issue has been resolved: https://bugs.openfoam.org/view.php?id=3163 i just did a "docker pull openfoam/openfoam6-paraview56" and i'm runnning fine now with no bugs. peace! Simon |
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April 20, 2019, 14:33 |
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#5 |
Member
Dokeun, Hwang
Join Date: Apr 2010
Location: Korea, Republic of
Posts: 98
Rep Power: 16 |
Hello there
I'm using OpenFoam-dev-parpaview56 in docker and I got the same log message. So I ran the command 'docker pull openfoam/openfoam-dev-paraview56' but the same errors I got. After searching for the answer, I found a thread that seems to be a solution but I can't understand their words especially last ones. Would you please let me know what means and how to "Update dockerfile for MPI (required by gmsh) " in attached image and url below https://github.com/open-mpi/ompi/issues/3625 Sincerely yours. Code:
-------------------------------------------------------------------------- The value of the MCA parameter "plm_rsh_agent" was set to a path that could not be found: plm_rsh_agent: ssh : rsh Please either unset the parameter, or check that the path is correct -------------------------------------------------------------------------- I changed the method to run by typing 'docker run -i -t <image#> -v <host dir>:<container dir>' And the problem solved... Last edited by dokeun; April 21, 2019 at 14:24. Reason: solved |
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Tags |
centos 7, docker, openfoam, parallel |
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