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[waves2Foam] Problems compiling waves2foam solver

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Old   May 12, 2016, 22:28
Default Problems compiling waves2foam solver
  #1
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Kenric
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Hello, i've been trying to use the waves2foam solver following the installation guide from https://openfoamwiki.net/index.php/Contrib/waves2Foam. However, i've get the error when i'm trying to compile the solver with wmake command. Would appreciate if I can get any help as this solver is important for my research. The error are as below:

g++ -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -I/opt/openfoam30/src/transportModels/twoPhaseMixture/lnInclude -I/opt/openfoam30/src/transportModels -I/opt/openfoam30/src/transportModels/incompressible/lnInclude -I/opt/openfoam30/src/transportModels/interfaceProperties/lnInclude -I/opt/openfoam30/src/TurbulenceModels/turbulenceModels/lnInclude -I/opt/openfoam30/src/TurbulenceModels/incompressible/lnInclude -I/opt/openfoam30/src/transportModels/immiscibleIncompressibleTwoPhaseMixture/lnInclude -I/opt/openfoam30/src/finiteVolume/lnInclude -I/opt/openfoam30/src/fvOptions/lnInclude -I/opt/openfoam30/src/meshTools/lnInclude -I/opt/openfoam30/src/sampling/lnInclude -DOFVERSION=300 -DEXTBRANCH=0 -DXVERSION= -I/waves2Foam/lnInclude -I/waves2FoamSampling/lnInclude -I -IlnInclude -I. -I/opt/openfoam30/src/OpenFOAM/lnInclude -I/opt/openfoam30/src/OSspecific/POSIX/lnInclude -fPIC -c waveFoam.C -o Make/linux64GccDPInt32Opt/waveFoam.o
waveFoam.C:55:28: fatal error: relaxationZone.H: No such file or directory
#include "relaxationZone.H"
^
compilation terminated.
make: *** [Make/linux64GccDPInt32Opt/waveFoam.o] Error 1

Thank you.
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Old   May 15, 2016, 01:55
Default Hi
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At a Glance, I can tell you that the header file
#include "relaxationZone.H" --> is missing from your .C and May be your solver Make/Files Do have included them, hence this conflict may arise
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Old   May 15, 2016, 04:25
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This is my waveFoam.C file and there is #include "relaxationZone.H" there but when i compile it it says no such file directory.
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.

OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.

You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.

Application
interFoam

Description
Solver for 2 incompressible, isothermal immiscible fluids using a VOF
(volume of fluid) phase-fraction based interface capturing approach.

The momentum and other fluid properties are of the "mixture" and a single
momentum equation is solved.

Turbulence modelling is generic, i.e. laminar, RAS or LES may be selected.

For a two-fluid approach see twoPhaseEulerFoam.

\*---------------------------------------------------------------------------*/

#include "fvCFD.H"
#include "CMULES.H"
#include "EulerDdtScheme.H"
#include "localEulerDdtScheme.H"
#include "CrankNicolsonDdtScheme.H"
#include "subCycle.H"
#include "immiscibleIncompressibleTwoPhaseMixture.H"
#include "turbulentTransportModel.H"
#include "pimpleControl.H"
#include "fvIOoptionList.H"
#include "CorrectPhi.H"
#include "fixedFluxPressureFvPatchScalarField.H"
#include "localEulerDdtScheme.H"
#include "fvcSmooth.H"

#include "relaxationZone.H"
#include "externalWaveForcing.H"

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"

pimpleControl pimple(mesh);

#include "createTimeControls.H"
#include "createRDeltaT.H"
#include "initContinuityErrs.H"

#include "readGravitationalAcceleration.H"
#include "readWaveProperties.H"
#include "createExternalWaveForcing.H"

#include "createFields.H"
#include "createMRF.H"
#include "createFvOptions.H"
#include "correctPhi.H"

if (!LTS)
{
#include "readTimeControls.H"
#include "CourantNo.H"
#include "setInitialDeltaT.H"
}

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

Info<< "\nStarting time loop\n" << endl;

while (runTime.run())
{
#include "readTimeControls.H"

if (LTS)
{
#include "setRDeltaT.H"
}
else
{
#include "CourantNo.H"
#include "alphaCourantNo.H"
#include "setDeltaT.H"
}

runTime++;

Info<< "Time = " << runTime.timeName() << nl << endl;

externalWave->step();

// --- Pressure-velocity PIMPLE corrector loop
while (pimple.loop())
{
#include "alphaControls.H"
#include "alphaEqnSubCycle.H"

relaxing.correct();

mixture.correct();

#include "UEqn.H"

// --- Pressure corrector loop
while (pimple.correct())
{
#include "pEqn.H"
}

if (pimple.turbCorr())
{
turbulence->correct();
}
}

runTime.write();

Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
<< " ClockTime = " << runTime.elapsedClockTime() << " s"
<< nl << endl;
}

// Close down the external wave forcing in a nice manner
externalWave->close();

Info<< "End\n" << endl;

return 0;
}


// ************************************************** *********************** //
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Old   May 15, 2016, 06:22
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Can you post the Make/Files & Options too?
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Old   May 15, 2016, 22:27
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this is the make files

waveFoam.C

EXE = $(FOAM_APPBIN)/waveFoam

whereas this is the options file

EXE_INC = \
-I$(LIB_SRC)/transportModels/twoPhaseMixture/lnInclude \
-I$(LIB_SRC)/transportModels \
-I$(LIB_SRC)/transportModels/incompressible/lnInclude \
-I$(LIB_SRC)/transportModels/interfaceProperties/lnInclude \
-I$(LIB_SRC)/TurbulenceModels/turbulenceModels/lnInclude \
-I$(LIB_SRC)/TurbulenceModels/incompressible/lnInclude \
-I$(LIB_SRC)/transportModels/immiscibleIncompressibleTwoPhaseMixture/lnInclude \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/fvOptions/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/sampling/lnInclude \
-DOFVERSION=300 \
-DEXTBRANCH=0 \
-DXVERSION=$(WAVES_XVERSION) \
-I$(WAVES_SRC)/waves2Foam/lnInclude \
-I$(WAVES_SRC)/waves2FoamSampling/lnInclude \
-I$(WAVES_GSL_INCLUDE)

EXE_LIBS = \
-limmiscibleIncompressibleTwoPhaseMixture \
-lturbulenceModels \
-lincompressibleTurbulenceModels \
-lfiniteVolume \
-lfvOptions \
-lmeshTools \
-lsampling \
-L$(WAVES_LIBBIN) \
-lwaves2Foam \
-lwaves2FoamSampling \
-L$(WAVES_GSL_LIB) \
-lgsl \
-lgslcblas

Really thank you for your time sir.
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Old   May 16, 2016, 07:36
Default Hi Kenric
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It looks like

a. In Make/files: Do not make the executable named waveFoam, unless you want to overwrite the non-meshmoving solver. Furthermore, place the executable in FOAM_USER_APPBIN instead of FOAM_APPBIN

b. Make sure all the paths mentioned in your make files/options are intact.
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Old   March 22, 2018, 04:43
Post W2F installation
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I was installing Wave2Foam but failed to excute Allwmake in wave2Foam folder at the last step.

it reporting the following msg:

ben@ben:~/waves2Foam$ ./Allwmake


=====================================
ENVIRONMENTAL VARIABLES
=====================================
EXTBRANCH=0
FOAMEXTENDPROJECT=0
OFPLUSBRANCH=0
WAVES_APPBIN=/home/ben/OpenFOAM/ben-4.1/platforms/linux64GccDPInt32Opt/bin
WAVES_DIR=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam
WAVES_GSL_INCLUDE=/usr/include
WAVES_GSL_LIB=/usr/lib64
WAVES_LIBBIN=/home/ben/OpenFOAM/ben-4.1/platforms/linux64GccDPInt32Opt/lib
WAVES_POST=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam/applications/utilities/postProcessing
WAVES_PRE=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam/applications/utilities/preProcessing
WAVES_SOL=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam/applications/solvers/solvers410
WAVES_SRC=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam/src
WAVES_TUT=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam/tutorials
WAVES_UTIL=/home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam/applications/utilities
WAVES_XVERSION=0
WM_PROJECT_VERSION_NUMBER=410


FATAL ERROR.
The directory path /home/ben/OpenFOAM/ben-4.1/applications/utilities/waves2Foam does not exist.
Correct the path in bin/bashrc

This means that you should correct the environmental variable $WAVES_DIR
such that it is pointed (in absolute sense) to the path, where waves2Foam
is located.

Please note that once bin/bashrc is created, bin/bashrc.org is only an
inactive file. The latter is also the only of the two files, which is
updated through the SVN-repository.

EXITING


Would appreciate your support.

Thx!
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Old   July 13, 2020, 23:40
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hello,Have you solved this problem? Because I have a similar problem.
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Old   August 2, 2020, 02:04
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You need to be in the waves2Foam directory and then do ./Allwmake again. The reason for the error is that it cannot find the relaxationZones.H unless you are at the correct path. I had a similar issue when I was trying to compile the code and its no longer an issue.



hth


Regards,
Akshay
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Old   August 4, 2020, 00:25
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Thank you very much for your response, I have resolved the issue.
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Old   August 14, 2020, 12:28
Default Compling error for wave2foam
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I have been trying to compile wave2foam however getting stuck at several points . Kindly look into the error and please suggest .




irwin@irwin-Precision-Tower-3420:~/OpenFOAM/irwin-dev/applications/utilities/waves2Foam$ ./Allwmake
dev


=====================================
COMPILE SOLVERS
=====================================
ls: cannot access '/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/applications/solvers/solversde_PLUS/*': No such file or directory

=====================================
COMPILE PRE-PROCESSING
=====================================
./Allwmake: line 123: [: de: integer expression expected
./Allwmake: line 123: [: de: integer expression expected
./Allwmake: line 123: [: de: integer expression expected
wmake faceSetToSTL
make[1]: Entering directory '/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/applications/utilities/preProcessing/faceSetToSTL'
Making dependency list for source file faceSetToSTL.C
could not open file foamTime.H for source file faceSetToSTL.C due to No such file or directory
could not open file faceTriangulation.H for source file faceSetToSTL.C due to No such file or directory
could not open file triSurface.H for source file faceSetToSTL.C due to No such file or directory
g++ -std=c++14 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -O3 -DNoRepository -ftemplate-depth-100 -I/opt/openfoam-dev/src/OpenFOAM/lnInclude -I/opt/openfoam-dev/src/meshTools/lnInclude -I/opt/openfoam-dev/src/surfMesh/lnInclude -I/opt/openfoam-dev/src/finiteVolume/lnInclude -DOFVERSION=de -DEXTBRANCH=1 -IlnInclude -I. -I/opt/openfoam-dev/src/OpenFOAM/lnInclude -I/opt/openfoam-dev/src/OSspecific/POSIX/lnInclude -fPIC -c faceSetToSTL.C -o Make/linux64GccDPInt32Opt/faceSetToSTL.o
faceSetToSTL.C:56:10: fatal error: faceTriangulation.H: No such file or directory
#include "faceTriangulation.H"
^~~~~~~~~~~~~~~~~~~~~
compilation terminated.
/opt/openfoam-dev/wmake/rules/General/transform:25: recipe for target 'Make/linux64GccDPInt32Opt/faceSetToSTL.o' failed
make[1]: *** [Make/linux64GccDPInt32Opt/faceSetToSTL.o] Error 1
make[1]: Leaving directory '/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/applications/utilities/preProcessing/faceSetToSTL'
/opt/openfoam-dev/wmake/makefiles/apps:39: recipe for target 'faceSetToSTL' failed
make: *** [faceSetToSTL] Error 2

=====================================
COMPILE POST-PROCESSING
=====================================
./Allwmake: line 170: [: de: integer expression expected
wmakeLnIncludeAll: running wmakeLnInclude on dependent libraries:
wmakeLnInclude error: base directory /home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/src/waves2Foam/src/ does not exist
Making dependency list for source file postProcessWaves2Foam.C
could not open file foamTime.H for source file postProcessWaves2Foam.C due to No such file or directory
g++ -std=c++14 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -O3 -DNoRepository -ftemplate-depth-100 -I/opt/openfoam-dev/src/OpenFOAM/lnInclude -I/opt/openfoam-dev/src/meshTools/lnInclude -I/opt/openfoam-dev/src/finiteVolume/lnInclude -I/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/src/waves2Foam/src/lnInclude -I/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude -I/usr/include -DOFVERSION=de -DEXTBRANCH=1 -IlnInclude -I. -I/opt/openfoam-dev/src/OpenFOAM/lnInclude -I/opt/openfoam-dev/src/OSspecific/POSIX/lnInclude -fPIC -c postProcessWaves2Foam.C -o Make/linux64GccDPInt32Opt/postProcessWaves2Foam.o
g++ -std=c++14 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -O3 -DNoRepository -ftemplate-depth-100 -I/opt/openfoam-dev/src/OpenFOAM/lnInclude -I/opt/openfoam-dev/src/meshTools/lnInclude -I/opt/openfoam-dev/src/finiteVolume/lnInclude -I/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/src/waves2Foam/src/lnInclude -I/home/irwin/OpenFOAM/irwin-dev/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude -I/usr/include -DOFVERSION=de -DEXTBRANCH=1 -IlnInclude -I. -I/opt/openfoam-dev/src/OpenFOAM/lnInclude -I/opt/openfoam-dev/src/OSspecific/POSIX/lnInclude -fPIC -fuse-ld=bfd -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/postProcessWaves2Foam.o -L/opt/openfoam-dev/platforms/linux64GccDPInt32Opt/lib \
-lOpenFOAM -lfiniteVolume -L/home/irwin/OpenFOAM/irwin-dev/platforms/linux64GccDPInt32Opt/lib -lwaves2Foam -lwaves2FoamProcessing -L/usr/lib64 -lgsl -lgslcblas -lOpenFOAM -ldl \
-lm -o /home/irwin/OpenFOAM/irwin-dev/platforms/linux64GccDPInt32Opt/bin/postProcessWaves2Foam
/usr/bin/ld.bfd: cannot find -lwaves2Foam
/usr/bin/ld.bfd: cannot find -lwaves2FoamProcessing
collect2: error: ld returned 1 exit status
/opt/openfoam-dev/wmake/makefiles/general:140: recipe for target '/home/irwin/OpenFOAM/irwin-dev/platforms/linux64GccDPInt32Opt/bin/postProcessWaves2Foam' failed
make: *** [/home/irwin/OpenFOAM/irwin-dev/platforms/linux64GccDPInt32Opt/bin/postProcessWaves2Foam] Error 1

=====================================
COMPILE BREEDER
=====================================
./Allwmake: line 194: [: de: integer expression expected

Nothing available for compilation in the breeder
directory.


=====================================
COMPILATION DONE
=====================================

irwin@irwin-Precision-Tower-3420:~/OpenFOAM/irwin-dev/applications/utilities/waves2Foam$
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Old   August 14, 2020, 21:39
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Hi Irwin,

You need to copy the solvers_1912 folder to your correct solvers_<yourVersion> and then compile from the right place. The compiler solvers section should be fixed if you do that. The reason why it complains is that it cannot find the the right solver folder.
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Old   January 2, 2021, 01:48
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Quote:
Originally Posted by Akshay_11235 View Post
You need to be in the waves2Foam directory and then do ./Allwmake again. The reason for the error is that it cannot find the relaxationZones.H unless you are at the correct path. I had a similar issue when I was trying to compile the code and its no longer an issue.



hth


Regards,
Akshay

Hi Akshay,


I have compiled waves2Foam without reporting the errors. But when I type 'waveFoam' in my console, it says 'waveFoam: command not found'.


below is part of my setting in the waves2Foam/bin bashrc file;


### USER DEFINED ENVIRONMENTAL VARIABLES
export WAVES_DIR=$HOME/OpenFOAM/OpenFOAM-v2012/applications/utilities/waves2Foam
export WAVES_APPBIN=$FOAM_USER_APPBIN
export WAVES_LIBBIN=$FOAM_USER_LIBBIN

export WAVES_GSL_INCLUDE=/usr/include
export WAVES_GSL_LIB=/usr/lib64


Could you have any idea about the problem i encounter, pls?


thk a lot
jie
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Old   January 2, 2021, 02:39
Default Copy Solvers to the version
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You need to copy the solvers from "applications/solvers/solvers1812_PLUS" to "applications/solvers/solvers2012_PLUS". That is my best guess!



If you can confirm whenever you compile something make sure you do something like "./Allwmake > make.log" , this way you can confirm that the solvers have been compiled and there were no errors.


Happy to help!
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Old   January 2, 2021, 03:46
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Hi Akshay,


Thanks very much for your prompt reply.



Following your suggestion, i have copied the solvers from "applications/solvers/solvers1812_PLUS" to "applications/solvers/solvers2012_PLUS". I then type "./Allwmake > make.log. There is still no error in my console, but only a failure info in the section "COMPILE SOVERS" of 'make.log', which says

"/home/user/OpenFOAM/OpenFOAM-v2012/wmake/rules/General/transform:34: recipe for target '/home/user/OpenFOAM/OpenFOAM-v2012/build/linux64GccDPInt32Opt/applications/utilities/waves2Foam/applications/solvers/solvers2012_PLUS/waveIsoFoam/waveIsoFoam.o' failed"


I then go to the tutorial folder of waves2Foam, e.g., /home/user/OpenFOAM/OpenFOAM-v2012/applications/utilities/waves2Foam/tutorials/waveFoam, and type './Allrun'. the problem still occurs, and in the file 'log.waveFoam', it says,


Hi --> FOAM FATAL IO ERROR: (openfoam-2012)
Entry 'inletCoeffs' not found in dictionary "/home/user/OpenFOAM/OpenFOAM-v2012/applications/utilities/waves2Foam/tutorials/waveFoam/standingWave/constant/waveProperties"


file: /home/user/OpenFOAM/OpenFOAM-v2012/applications/utilities/waves2Foam/tutorials/waveFoam/standingWave/constant/waveProperties at line 17 to 21.

From const Foam::dictionary& Foam::dictionary::subDict(const Foam::word&, Foam::keyType:ption) const
in file db/dictionary/dictionary.C at line 537.

FOAM exiting"


As the tutorial files are well prepared by others, i assume the problem is still from my side, where i could make something wrong in compiling the waves2Foam.


Hope to hear your future instructions,


many thanks again Akshay,
jie
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Old   January 2, 2021, 03:58
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Hi Akshay,


another thing is that after i have copied the solvers from "applications/solvers/solvers1812_PLUS" to "applications/solvers/solvers2012_PLUS", and re-compiled, when I type "waveFoam", now my console shows that

"--> FOAM FATAL ERROR: (openfoam-2012)
cannot find file "/home/user/OpenFOAM/OpenFOAM-v2012/applications/utilities/waves2Foam/system/controlDict"

From virtual Foam::autoPtr<Foam::ISstream> Foam::fileOperations::uncollatedFileOperation::rea dStream(Foam::regIOobject&, const Foam::fileName&, const Foam::word&, bool) const
in file global/fileOperations/uncollatedFileOperation/uncollatedFileOperation.C at line 547.
"
instead of the previous command of 'waveFoam: command not found'.


jie
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