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Postprocessing the simulation output VTU file with Python |
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February 12, 2022, 12:59 |
Postprocessing the simulation output VTU file with Python
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J Powell
Join Date: Feb 2022
Posts: 12
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Hello, I want to explore more in my VTU file (attached) besides using Paraview, I try to write a Python script (attached) to read my VTU file, like store all the results to lists, so I can do some analysis.
I have tried both two packages from this link, https://stackoverflow.com/questions/...w-vtk-vtu-file and they don’t work for me. Anyone can please provide a good package? VTU looks like (too big to upload) <?xml version='1.0'?> <VTKFile type='UnstructuredGrid' version='0.1' byte_order='LittleEndian' compressor='vtkZLibDataCompressor'> <UnstructuredGrid> <Piece NumberOfPoints='1368' NumberOfCells='342'> <PointData> </PointData> <CellData Scalars='area failure mode length opening 0 opening 1 opening 2 property id slip 0 slip 1 slip 2 '> <DataArray Name='area' type='Float64' NumberOfComponents='1' format='appended' offset='0'></DataArray> <DataArray Name='failure mode' type='Float32' NumberOfComponents='1' format='appended' offset='200'></DataArray> <DataArray Name='length' type='Float64' NumberOfComponents='1' format='appended' offset='256'></DataArray> <DataArray Name='opening 0' type='Float64' NumberOfComponents='1' format='appended' offset='448'></DataArray> <DataArray Name='opening 1' type='Float64' NumberOfComponents='1' format='appended' offset='636'></DataArray> <DataArray Name='opening 2' type='Float64' NumberOfComponents='1' format='appended' offset='824'></DataArray> <DataArray Name='property id' type='Int32' NumberOfComponents='1' format='appended' offset='1020'></DataArray> <DataArray Name='slip 0' type='Float64' NumberOfComponents='1' format='appended' offset='1076'></DataArray> <DataArray Name='slip 1' type='Float64' NumberOfComponents='1' format='appended' offset='1272'></DataArray> <DataArray Name='slip 2' type='Float64' NumberOfComponents='1' format='appended' offset='1468'></DataArray> </CellData> <Points> <DataArray type='Float64' NumberOfComponents='3' format='appended' offset='1660'></DataArray> </Points> <Cells> <DataArray Name='connectivity' type='Int32' NumberOfComponents='1' format='appended' offset='10776'></DataArray> <DataArray Name='offsets' type='Int32' NumberOfComponents='1' format='appended' offset='13384'></DataArray> <DataArray Name='types' type='UInt8' NumberOfComponents='1' format='appended' offset='14032'></DataArray> </Cells> </Piece> </UnstructuredGrid> <AppendedData encoding='base64'> 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JMhCgx4iRIkiJNhiw58hQoUqJMhSo16jRo0qJNhy49+gwYMmLM hCkz5ixYsmLNhi079hw4cuLMhSs37jx48uLNLx++BP76J0iIMB GixIiTIEmKNBmy5MhToEiJMhWq/ANGp6RoAQAAAFYBAABWAQAADQAAAA==eNrj4BgF1AcAKqcKsQ= = </AppendedData> </VTKFile> Last edited by miraboreasu; February 12, 2022 at 13:00. Reason: python |
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June 24, 2022, 18:18 |
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#3 |
New Member
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You can also checkout VTUinterface for I/O. It uses the standard VTK wrapper for Python, but is simpler to use and also has some added functionalities.
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May 9, 2024, 01:17 |
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#4 |
New Member
TCCmt
Join Date: May 2024
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Hello,
I'm currently facing the same issue. I have tried using meshio, but gives an error since the data in the vtu file is "Appended". I get the following message: Unknown data format 'append'. Error: Couldn't read file <file-name>.vtu as vtu Also, I was not able to make it work with xml. Any guidance? |
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May 13, 2024, 06:49 |
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#5 |
New Member
Join Date: Jun 2022
Posts: 2
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The data format is called 'appended' and not 'append'. So this is very likely a typo.
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