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October 31, 2016, 21:11 |
HiFiLES installation problem
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#1 |
New Member
Wenkun Zhao
Join Date: Mar 2015
Location: Nanjing, China
Posts: 14
Rep Power: 11 |
Hi
I am not sure if I am in the correct sub-forum to post my question, but I know about HiFiLES solvers in a SU2 community, so I'm here When I compile HiFiLES on Ubuntu14.04, I have encountered a problem. I have read README.md in the HiFiLES dictionary and used the following commands to install: (1) bash configure_run.sh (2) make and this is (1) output: Code:
checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes <<< Configuring library with Metis support >>> ./configure: line 3027: AX_TLS: command not found checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether mpicc accepts -g... yes checking for style of include used by make... GNU checking dependency style of mpicc... gcc3 checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking whether gcc and cc understand -c and -o together... yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpicc -E checking for ld used by mpicc... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: creating ./config.status config.status: creating lib/parmetis-4.0.2/Makefile config.status: creating lib/parmetis-4.0.2/metis/Makefile config.status: creating Makefile config.status: creating lib/Makefile config.status: creating obj/Makefile config.status: executing depfiles commands config.status: executing libtool commands Build Configuration Summary: Source code location: /home/Ubuntu/HiFiLES Install location: /home/Ubuntu/HiFiLES Version: 1.0.0 Compiler: mpicc Preprocessor flags: Compiler flags: -D_MPI Linker flags: BLAS support: NO MPI support: YES CUDA support: NO TecIO support: NO and the (2) output: Code:
Making all in lib make[1]: Entering directory `/home/Ubuntu/HiFiLES/lib' Making all in parmetis-4.0.2/ make[2]: Entering directory `/home/Ubuntu/HiFiLES/lib/parmetis-4.0.2' Making all in metis/ make[3]: Entering directory `/home/Ubuntu/HiFiLES/lib/parmetis-4.0.2/metis' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/Ubuntu/HiFiLES/lib/parmetis-4.0.2/metis' make[3]: Entering directory `/home/Ubuntu/HiFiLES/lib/parmetis-4.0.2' CC libparmetis/libparmetis_a-akwayfm.o In file included from ./libparmetis/parmetislib.h:21:0, from libparmetis/akwayfm.c:14: ./include/parmetis.h:18:19: fatal error: metis.h: No such file or directory #include <metis.h> ^ compilation terminated. make[3]: *** [libparmetis/libparmetis_a-akwayfm.o] Error 1 make[3]: Leaving directory `/home/Ubuntu/HiFiLES/lib/parmetis-4.0.2' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/home/Ubuntu/HiFiLES/lib/parmetis-4.0.2' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/Ubuntu/HiFiLES/lib' make: *** [all-recursive] Error 1 I have attached zipped relative files named compile.zip at the end. Any help would be appreciated! Thanks a lot! Best, Eric |
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