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November 18, 2021, 13:20 |
Hardware Limit to Cell Number?
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#1 |
Member
Ismael Incoencio
Join Date: Sep 2021
Posts: 45
Rep Power: 7 |
Hi I just wanted to ask if there was a limit to the number of cells, and if it's related to the hardware I'm on. Just for context in the details below, L33 is the computer name of my office issued laptop with the specs
Intel i7-10750H CPU @ 2.6 GHz; 6 cores; 12 logical processors To illustrate, if I create a large domain as such: B 1 0.05 B 10 0.0 16.0 0.0 7.0 0.0 8.0 I get the error "starting ini creating objects probepoint_num 3 Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. mpirun noticed the process rank 4 with PID 0 on node L33 exited on signal 9 (Killed)." So it works up to that point before the error. But if I make the domain 1m smaller in one direction: B 10 0.0 16.0 0.0 7.0 0.0 7.0 it gets a bit further "starting ini creating objects etc etc [then at the first time step] 1 simtime:0 Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. mpirun noticed the process rank 4 with PID 0 on node L33 exited on signal 9 (Killed)." And only proceeds to the simulation if the domain is at: B 10 0.0 15.0 0.0 7.0 0.0 6.0 Is this due to my limited hardware, or is there an actual cap in cells? Or something else entirely that I am not yet familiar with?
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November 18, 2021, 13:37 |
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#2 |
Super Moderator
Hans Bihs
Join Date: Jun 2009
Location: Trondheim, Norway
Posts: 403
Rep Power: 19 |
Hi Ismael,
could you upload the input files? Then I can have a look. |
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November 19, 2021, 02:39 |
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#3 |
Member
Ismael Incoencio
Join Date: Sep 2021
Posts: 45
Rep Power: 7 |
Good afternoon Prof Hans,
Thanks, here are the files; the ones without a suffix are able to run on my laptop.
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November 19, 2021, 04:24 |
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#4 |
Senior Member
Arun Kamath
Join Date: Nov 2014
Location: Trondheim, Norway
Posts: 265
Rep Power: 14 |
Unfortunately, I was not able to reproduce your error. So I would guess it is more of a local issue.
Although, I would be interested to know the partition output you get towards the end of the Divemesh run and also the actual partition of the domain. The latter you can look at using the output in the DIVEMesh_Paraview folder.
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Arun X years with REEF3D |
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November 19, 2021, 05:04 |
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#5 |
Member
Ismael Incoencio
Join Date: Sep 2021
Posts: 45
Rep Power: 7 |
I guess it is a local issue; when I adjusted it further to
B 10 0.0 15.0 0.0 7.0 0.0 8.0 it still works. I was having trouble with an apparent vortex occurring at the end of the domain, and I thought it might be because of the relatively small head clearance, which is why I was trying to increase my initial domain. I've attached a screenshot of the domain with the partitions.
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December 1, 2021, 03:32 |
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#6 |
Member
Ismael Incoencio
Join Date: Sep 2021
Posts: 45
Rep Power: 7 |
I tried this again with a new domain created from scratch, and it does indeed look like a limitation on my hardware that there is an upper limit to the number of cells.
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December 1, 2021, 06:18 |
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#7 |
Super Moderator
Hans Bihs
Join Date: Jun 2009
Location: Trondheim, Norway
Posts: 403
Rep Power: 19 |
Hi Ismael,
which system do you use to run the simulations? It sounds more like an OS limitation, maybe you use virtualization? |
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December 1, 2021, 12:36 |
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#8 |
Member
Ismael Incoencio
Join Date: Sep 2021
Posts: 45
Rep Power: 7 |
Good morning Prof Hans,
Yes, I am using the Ubuntu app for Windows 10; specifically Ubuntu 20.04.3 LTS (GNU/LInux 5.10.16.3-microsoft-standard-WSL2 x86_64) Edit: And only 16 GB of RAM
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Still learning Last edited by IADInocencio; December 5, 2021 at 11:46. |
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