CFD Online Logo CFD Online URL
www.cfd-online.com
[Sponsors]
Home > Forums > Software User Forums > OpenFOAM

Error when running in parallel

Register Blogs Community New Posts Updated Threads Search

Reply
 
LinkBack Thread Tools Search this Thread Display Modes
Old   October 23, 2009, 09:33
Default Error when running in parallel
  #1
Member
 
vishwanath somashekar
Join Date: Apr 2009
Posts: 41
Rep Power: 17
vishwa is on a distinguished road
Hi,
I have been running pisoFoam on a case for a like a week or so and have not encountered any problem. Since yesterday, the simualtion stops after like 20 mins into the run giving the following error

Quote:
4] #0 Foam::error:rintStack(Foam::Ostream&) in "/home/vishwa/vishwa/OpenFOAM/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libOpenFOAM.so"
[4] #1 Foam::sigSegv::sigSegvHandler(int) in "/home/vishwa/vishwa/OpenFOAM/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libOpenFOAM.so"
[4] #2 __restore_rt at sigaction.c:0
[node160:27364] *** Process received signal ***
[node160:27364] Signal: Segmentation fault (11)
[node160:27364] Signal code: (-6)
[node160:27364] Failing at address: 0xfd000006ae4
[node160:27364] [ 0] /lib64/libc.so.6 [0x3996030280]
[node160:27364] [ 1] /lib64/libc.so.6(gsignal+0x35) [0x3996030215]
[node160:27364] [ 2] /lib64/libc.so.6 [0x3996030280]
[node160:27364] *** End of error message ***
--------------------------------------------------------------------------
mpirun noticed that process rank 4 with PID 27364 on node node160 exited on signal 11 (Segmentation fault).
I tried to restart the simulation with the data that had already been saved before this error occurred.. The result was the same..it ran for like 20 mins and stopped with the same error.

Have no clue what to do. Any help please..

Regards,
Vishwa
vishwa is offline   Reply With Quote

Old   October 23, 2009, 09:42
Default
  #2
Member
 
vishwanath somashekar
Join Date: Apr 2009
Posts: 41
Rep Power: 17
vishwa is on a distinguished road
here is the controlDict that I am using

/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 1.6 |
| \\ / A nd | Web: www.OpenFOAM.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
location "system";
object controlDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

application pisoFoam;

startFrom latestTime;

startTime 0;

stopAt endTime;

endTime 954e-04;

deltaT 2e-06;

writeControl timeStep;

writeInterval 400;

purgeWrite 0;

writeFormat binary;//ascii;

writePrecision 6;

writeCompression compressed;

timeFormat general;

timePrecision 6;

runTimeModifiable yes;

adjustTimeStep yes;

maxCo 0.5;

maxDeltaT 1e-04;
functions
{
/*probes1
{
type surfaces;
functionObjectLibs ("libsampling.so");
//enabled true;
outputControl timeStep;
outputInterval 50;
surfaceFormat vtk;
interpolationScheme cellPointFace;

fields
(
U
p

);


surfaces
(
midplane
{
type plane;
basePoint (0 -0.086 0.00046);
normalVector (0 0 1);
}
);

}*/
fieldAverage1
{
type fieldAverage;
functionObjectLibs ("libfieldFunctionObjects.so");
//cleanRestart true;
enabled true;
outputControl outputTime;
fields
(
U
{
mean on;
prime2Mean on;
base time;
}

p
{
mean on;
prime2Mean on;
base time;
}
);
}

}


/*functions
{
probes
{
type probes;
functionObjectLibs ("libsampling.so");
enabled true;
outputControl timeStep;
outputInterval 1;
probeLocations
(
( 0.0254 0.0253 0 )
( 0.0508 0.0253 0 )
( 0.0762 0.0253 0 )
( 0.1016 0.0253 0 )
( 0.127 0.0253 0 )
( 0.1524 0.0253 0 )
( 0.1778 0.0253 0 )
);

fields
(
p
);
}

fieldAverage1
{
type fieldAverage;
functionObjectLibs ("libfieldFunctionObjects.so");
enabled true;
outputControl outputTime;
fields
(
U
{
mean on;
prime2Mean on;
base time;
}

p
{
mean on;
prime2Mean on;
base time;
}
);
}
*/
}


// ************************************************** *********************** //
vishwa is offline   Reply With Quote

Reply


Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are On
Refbacks are On


Similar Threads
Thread Thread Starter Forum Replies Last Post
User fortran error when running CFX-10 in parallel CFDworker CFX 3 September 22, 2015 09:59
running OpenFoam in parallel vishwa OpenFOAM Running, Solving & CFD 22 August 2, 2015 09:53
Statically Compiling OpenFOAM Issues herzfeldd OpenFOAM Installation 21 January 6, 2009 10:38
Kubuntu uses dash breaks All scripts in tutorials platopus OpenFOAM Bugs 8 April 15, 2008 08:52
running multiple Fluent parallel jobs Michael Bo Hansen FLUENT 8 June 7, 2006 09:52


All times are GMT -4. The time now is 14:15.