CFD Online Logo CFD Online URL
www.cfd-online.com
[Sponsors]
Home > Forums > Software User Forums > OpenFOAM

Openfoam running error in parallel in Cluster

Register Blogs Community New Posts Updated Threads Search

Reply
 
LinkBack Thread Tools Search this Thread Display Modes
Old   February 19, 2017, 09:58
Smile Openfoam running error in parallel in Cluster
  #1
Member
 
sibo
Join Date: Oct 2016
Location: Chicago
Posts: 55
Rep Power: 10
sibo is on a distinguished road
Hi All,

I was trying to run the airfoil flow field simulation in parallel using Cluster. I decompose the domain into 4 and run it using simpleFoam with 4 processors.

Then I get the following Errors:

COLOR="Red"]Create time

Create mesh for time = 0

Reading field p

Reading field U

Reading/calculating face flux field phi

Selecting incompressible transport model Newtonian
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.[/COLOR]

--------------------------------------------------------------------------

But the exactly same case, can be run successfully in serial and even in parallel with 4 processors in my own laptop. But when i submit this job into Cluster, it said the error. And i also checked the decompose.log file, the domain was decomposed successfully. The above error is read from the case.log file.

Thanks in advance for your time!!
Any guide will be helpful.
sibo is offline   Reply With Quote

Old   February 19, 2017, 10:03
Default
  #2
Member
 
sibo
Join Date: Oct 2016
Location: Chicago
Posts: 55
Rep Power: 10
sibo is on a distinguished road
This is the entire case.log file:

Build : 2.1.x-ccbaf836072a
Exec : simpleFoam -parallel
Date : Feb 19 2017
Time : 21:27:00
Host : "compute-0-27.local"
PID : 62927
Case : /mnt/store1/home/sli218/2.18/angle-10NEW
nProcs : 4
Slaves :
3
(
"compute-0-27.local.62928"
"compute-0-27.local.62929"
"compute-0-27.local.62930"
)

Pstream initialized with:
floatTransfer : 0
nProcsSimpleSum : 0
commsType : nonBlocking
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Disallowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0

Reading field p

Reading field U

Reading/calculating face flux field phi

Selecting incompressible transport model Newtonian
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
sibo is offline   Reply With Quote

Old   February 25, 2017, 14:26
Default
  #3
Senior Member
 
Join Date: Nov 2010
Location: USA
Posts: 1,232
Rep Power: 25
me3840 is on a distinguished road
You are looking at the stdout and it doesn't show the actual error. Your cluster should generate a stderr file with you should read, that will have the fault in it.
me3840 is offline   Reply With Quote

Reply

Tags
cluster, openfoam, parallel


Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are On
Refbacks are On


Similar Threads
Thread Thread Starter Forum Replies Last Post
OpenFOAM v3.0+ ?? SBusch OpenFOAM 22 December 26, 2016 15:24
openfoam pow() fails when running parallel Carlen OpenFOAM Programming & Development 9 February 23, 2015 03:02
Running Error using Compressible OpenFoam Parallel mode dhendria OpenFOAM Running, Solving & CFD 0 February 13, 2014 21:53
Running OpenFoam on a Computer Cluster in the Cloud - cloudnumbers.com Markus Schmidberger OpenFOAM Announcements from Other Sources 0 July 26, 2011 09:18
Running in Parallel on cluster NewFoamer OpenFOAM Running, Solving & CFD 3 November 3, 2010 17:20


All times are GMT -4. The time now is 15:34.