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Old   March 9, 2019, 19:19
Default fixedProfile kOmega
  #1
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Mazen Draw
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Hello everyone!


Lately, I have been working on implementing Omega profile in the inlet BC of an ABL flow that I've seen in some paper. The idea is to define Omega based on k and epsilon. So one has to go from k-epsilon model to k-omega model.
For modeling k in a previous k-epsilon case I used fixedProfile type in the inlet BC and imported data from csv.file and it worked without any errors. I want to do the same for omega, but I am getting the following exception:


Code:
/*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  5.x                                   |
|   \\  /    A nd           | Web:      www.OpenFOAM.org                      |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Build  : 5.x-68e8507efb72
Exec   : simpleFoam
Date   : Mar 10 2019
Time   : 00:03:46
Host   : "mazen"
PID    : 2281
I/O    : uncollated
Case   : /home/mazen/ownCloud/MasterThesis_WtG_ValidationCase/Mazen/14.09/simulations/Mazen/CukOmegaS2
nProcs : 1
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster (fileModificationSkew 10)
allowSystemOperations : Allowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0


SIMPLE: convergence criteria
    field p     tolerance 1e-06
    field Ux     tolerance 1e-06
    field Uy     tolerance 1e-06
    field Uz     tolerance 1e-06
    field "(k|epsilon|omega)"     tolerance 1e-06

Reading field p

Reading field U

Reading/calculating face flux field phi

Selecting incompressible transport model Newtonian
Selecting turbulence model type RAS
Selecting RAS turbulence model kOmega


--> FOAM FATAL IO ERROR: 
wrong token type - expected Scalar, found on line 0 the word '0.0001'

file: IStringStream.sourceFile at line 0.

    From function Foam::Istream& Foam::operator>>(Foam::Istream&, Foam::doubleScalar&)
    in file lnInclude/Scalar.C at line 93.

FOAM exiting
Inlet BC in Omega file:
Code:
boundaryField

{

    IN

    {

        type            fixedProfile;

    profile        csvFile;//[Yang 2009]

        profileCoeffs

        {

            nHeaderLine     0;

            refColumn       0;

            componentColumns (1);

            separator       ",";

            mergeSeparators no;

            file            "0/Omegaprofile.csv";

        outOfBounds        clamp;

        interpolationScheme linear;

        }

        direction       (0 0 1);

        origin          0;

    }
I am using simpleFoam solver on OF v. 5.x
I wonder why I am getting this exception since the values in csv.file are of double scalar type which is what's needed.


Anyone has an idea?
Thanks in advance!
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Old   March 10, 2019, 20:09
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Looks like the scalar entry is being treated as a string given it's reading it as '0.0001' instead of 0.0001. Maybe you need to check your csv file. Try opening it in a text editor like gedit, notepad or vim. Are there quotations around the numbers?
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Old   January 23, 2023, 08:08
Default About fixedProfile kepsilon
  #3
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Eren Kaya
Join Date: Jan 2023
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Hi MazenDraw, I wish you a good year.

I am working on an OpenFOAM CFD project for my graduation thesis. I want to implement k and epsilon values to specific locations using fixedProfile command and csvFile. My 0.k and 0.epsilon files are completely same with yours except the direction, which is (0 1 0) since it is in y-direction. After the iterations, when OpenFOAM begin to write the iteration results to timestep file, i.e. for my case 500, I am receiving an error message that is:

--> FOAM FATAL ERROR: (openfoam-2206)
unallocated autoPtr of type N4Foam9Function1INS_10SymmTensorIdEEEE

From T* Foam::autoPtr<T>:: operator->() [with T = Foam::Function1<Foam::SymmTensor<double> >]
in file /usr/src/packages/BUILD/src/OpenFOAM/lnInclude/autoPtrI.H at line 178.

FOAM aborting

I've searched the forum for this error but I could not find a solution. Can you give me any advice if you have encountered this error before? Thanks a lot.

Quote:
Originally Posted by MazenDraw View Post
Hello everyone!


Lately, I have been working on implementing Omega profile in the inlet BC of an ABL flow that I've seen in some paper. The idea is to define Omega based on k and epsilon. So one has to go from k-epsilon model to k-omega model.
For modeling k in a previous k-epsilon case I used fixedProfile type in the inlet BC and imported data from csv.file and it worked without any errors. I want to do the same for omega, but I am getting the following exception:


Code:
/*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  5.x                                   |
|   \\  /    A nd           | Web:      www.OpenFOAM.org                      |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Build  : 5.x-68e8507efb72
Exec   : simpleFoam
Date   : Mar 10 2019
Time   : 00:03:46
Host   : "mazen"
PID    : 2281
I/O    : uncollated
Case   : /home/mazen/ownCloud/MasterThesis_WtG_ValidationCase/Mazen/14.09/simulations/Mazen/CukOmegaS2
nProcs : 1
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster (fileModificationSkew 10)
allowSystemOperations : Allowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0


SIMPLE: convergence criteria
    field p     tolerance 1e-06
    field Ux     tolerance 1e-06
    field Uy     tolerance 1e-06
    field Uz     tolerance 1e-06
    field "(k|epsilon|omega)"     tolerance 1e-06

Reading field p

Reading field U

Reading/calculating face flux field phi

Selecting incompressible transport model Newtonian
Selecting turbulence model type RAS
Selecting RAS turbulence model kOmega


--> FOAM FATAL IO ERROR: 
wrong token type - expected Scalar, found on line 0 the word '0.0001'

file: IStringStream.sourceFile at line 0.

    From function Foam::Istream& Foam::operator>>(Foam::Istream&, Foam::doubleScalar&)
    in file lnInclude/Scalar.C at line 93.

FOAM exiting
Inlet BC in Omega file:
Code:
boundaryField

{

    IN

    {

        type            fixedProfile;

    profile        csvFile;//[Yang 2009]

        profileCoeffs

        {

            nHeaderLine     0;

            refColumn       0;

            componentColumns (1);

            separator       ",";

            mergeSeparators no;

            file            "0/Omegaprofile.csv";

        outOfBounds        clamp;

        interpolationScheme linear;

        }

        direction       (0 0 1);

        origin          0;

    }
I am using simpleFoam solver on OF v. 5.x
I wonder why I am getting this exception since the values in csv.file are of double scalar type which is what's needed.


Anyone has an idea?
Thanks in advance!
erenbkaya is offline   Reply With Quote

Old   January 23, 2023, 08:45
Default
  #4
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Mazen Draw
Join Date: Sep 2018
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Hello Eren,

This has been long time ago and I don't really have the files for this case anymore. If I remember correctly it is similar to your data, z coordinates in the first column and k values in the second.

To give you something to work with, you can check out the boundary condition specifications of this tutorial https://github.com/OpenFOAM/OpenFOAM.../0/T.particles


And here you can find the data file they used for it: https://github.com/OpenFOAM/OpenFOAM...allTemperature


I know you are using a different version of OpenFOAM, but this boundary condition is so old that I can imagine it is almost identical in both versions.


Finally pay attention to the entries: "nHeaderLin", "refColumn" and "componentColumns". They tell the solver where to start parsing the data from the data file.
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Old   January 23, 2023, 08:54
Default
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Eren Kaya
Join Date: Jan 2023
Posts: 8
Rep Power: 3
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Thanks for your quick responding Mazen! Have a good day.

Quote:
Originally Posted by MazenDraw View Post
Hello Eren,

This has been long time ago and I don't really have the files for this case anymore. If I remember correctly it is similar to your data, z coordinates in the first column and k values in the second.

To give you something to work with, you can check out the boundary condition specifications of this tutorial https://github.com/OpenFOAM/OpenFOAM.../0/T.particles


And here you can find the data file they used for it: https://github.com/OpenFOAM/OpenFOAM...allTemperature


I know you are using a different version of OpenFOAM, but this boundary condition is so old that I can imagine it is almost identical in both versions.


Finally pay attention to the entries: "nHeaderLin", "refColumn" and "componentColumns". They tell the solver where to start parsing the data from the data file.
erenbkaya is offline   Reply With Quote

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