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Old   July 22, 2016, 05:39
Default Error running in parallel
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K.H
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Hi foamers
I am using dns for simulation of turbulent channel flow with blockstructured meshes. When i run the case in parallel with only 4 processors everything is working fine. But as soon as I increase the number of processors using decomposepar i get the error massage:



/*---------------------------------------------------------------------------*\
| ========= | |
| \\ / F ield | foam-extend: Open Source CFD |
| \\ / O peration | Version: 3.2 |
| \\ / A nd | Web: http://www.foam-extend.org |
| \\/ M anipulation | For copyright notice see file Copyright |
\*---------------------------------------------------------------------------*/
Build : 3.2-334ba0562a2c
Exec : PFoam -case ./ -parallel
Date : Jul 22 2016
Time : 10:10:34
Host : knoten-13
PID : 7408
CtrlDict : "/home/studenten/stud-konhat/RZZN/Betrieb_Retau_180/Y+04_15/system/controlDict"
Case : /home/studenten/stud-konhat/RZZN/Betrieb_Retau_180/Y+04_15
nProcs : 15
Slaves :
14
(
knoten-13.7409
knoten-13.7410
knoten-13.7411
knoten-13.7412
knoten-13.7413
knoten-13.7414
knoten-13.7415
knoten-13.7416
knoten-13.7417
knoten-13.7418
knoten-13.7419
knoten-13.7420
knoten-13.7421
knoten-13.7422
)

Pstream initialized with:
nProcsSimpleSum : 16
commsType : blocking
SigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0.002

[knoten-13:7419] *** An error occurred in MPI_Bsend
[knoten-13:7419] *** on communicator MPI_COMM_WORLD
[knoten-13:7419] *** MPI_ERR_BUFFER: invalid buffer pointer
[knoten-13:7419] *** MPI_ERRORS_ARE_FATAL: your MPI job will now abort
--------------------------------------------------------------------------
mpirun has exited due to process rank 11 with PID 7419 on
node knoten-13 exiting improperly. There are two reasons this could occur:

1. this process did not call "init" before exiting, but others in
the job did. This can cause a job to hang indefinitely while it waits
for all processes to call "init". By rule, if one process calls "init",
then ALL processes must call "init" prior to termination.

2. this process called "init", but exited without calling "finalize".
By rule, all processes that call "init" MUST call "finalize" prior to
exiting or it will be considered an "abnormal termination"

This may have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
--------------------------------------------------------------------------
[knoten-13:07407] 2 more processes have sent help message help-mpi-errors.txt / mpi_errors_are_fatal
[knoten-13:07407] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages


Did anyone have the same trouble??
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Old   July 24, 2016, 15:21
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Hi,

what happens if you change the method of the domain decomposition ? did you try ?

regards,

T.D.
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Old   July 25, 2016, 06:54
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K.H
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Thanks for your reply. I tried to change the method of the domain decomposition but the same error still appears. But I managed to avoid the error massage:

[knoten-13:7419] *** An error occurred in MPI_Bsend
[knoten-13:7419] *** on communicator MPI_COMM_WORLD
[knoten-13:7419] *** MPI_ERR_BUFFER: invalid buffer pointer
[knoten-13:7419] *** MPI_ERRORS_ARE_FATAL: your MPI job will now abor

by increasing the MPI buffer size.
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Old   July 25, 2016, 07:42
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Derek Mitchell
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Has this ever worked?
When did it stop working??
what changed between now and then?
Have you tried with a simple parallel tutorial case?
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