CFD Online Logo CFD Online URL
www.cfd-online.com
[Sponsors]
Home > Forums > Software User Forums > OpenFOAM > OpenFOAM Installation

Conflicting installations for gcc

Register Blogs Community New Posts Updated Threads Search

Reply
 
LinkBack Thread Tools Search this Thread Display Modes
Old   August 22, 2006, 12:46
Default Hi all, I'm having problems
  #1
New Member
 
Fabrizio Bisetti
Join Date: Mar 2009
Posts: 3
Rep Power: 17
fbisetti is on a distinguished road
Hi all,

I'm having problems installing OpenFOAM from binaries. I followed (I hope correctly) the instructions. As I run the installation check, I get 1 critical error abour conflicting gcc as below:

gcc 3.3.6
WARNING: Conflicting installations:
foam settings: /home/fbisetti/OpenFOAM/linux/gcc-4.1.0/bin/gcc
current path : /usr/bin/gcc
CRITICAL ERROR

I found some posts on a similar problem for previous versions of gcc. There it seemed that the problem was a misplaced linux/gcc-x.x.x directory, but I'm positive the gcc I downloaded from your website is placed correctly. See that

ls -lt /home/fbisetti/OpenFOAM/linux/gcc-4.1.0/bin/gcc

returns:
-rwxr-xr-x 3 fbisetti users 299700 Mar 5 15:39 /home/fbisetti/OpenFOAM/linux/gcc-4.1.0/bin/gcc

Do I have to do something else to override my system installation of gcc?

Thanks a lot,
Fabrizio
fbisetti is offline   Reply With Quote

Old   August 22, 2006, 17:12
Default If you are on a 64-bit system,
  #2
Senior Member
 
Srinath Madhavan (a.k.a pUl|)
Join Date: Mar 2009
Location: Edmonton, AB, Canada
Posts: 703
Rep Power: 21
msrinath80 is on a distinguished road
If you are on a 64-bit system, you need to do an export WM_64=on in your ~/.bashrc

Also, you need to put all the third party stuff (gcc, paraview et al.) into ~/OpenFOAM/linuxAMD64
msrinath80 is offline   Reply With Quote

Old   August 22, 2006, 17:28
Default Sorry but I don't see the rele
  #3
New Member
 
Fabrizio Bisetti
Join Date: Mar 2009
Posts: 3
Rep Power: 17
fbisetti is on a distinguished road
Sorry but I don't see the relevance. I do not have a AMD and/or a 64-bit system. The problem seems to be somewhere else.

If I didn't understand the suggestion, can you please clearify?

Thanks again,
fb
fbisetti is offline   Reply With Quote

Old   August 22, 2006, 18:41
Default You probably need to check tha
  #4
Senior Member
 
Gavin Tabor
Join Date: Mar 2009
Posts: 181
Rep Power: 17
grtabor is on a distinguished road
You probably need to check that /home/fbisetti/OpenFOAM/linux/gcc-4.1.0/bin comes first in your $PATH, so that it gets searched before /usr/bin. Are you sourcing .OpenFOAM-1.3/cshrc correctly?

Gavin
grtabor is offline   Reply With Quote

Old   September 27, 2006, 06:43
Default I have the same problem. I've
  #5
New Member
 
Rickard Bensow
Join Date: Mar 2009
Location: Göteborg, Sweden
Posts: 10
Rep Power: 17
ribe is on a distinguished road
I have the same problem. I've set the path so that gcc-4.1.0 comes first and all $WM_COMPILER* environment variables point to the correct location. Any other tries to make or options to set the compiler for wmake?

/Rickard
ribe is offline   Reply With Quote

Old   November 5, 2006, 15:56
Default I have the same troblem too. I
  #6
vivekjoshi
Guest
 
Posts: n/a
I have the same troblem too. I have a 32 bit SUSE 10.1 linux installation. I am not able to get rid of the critical error.
gcc 4.1.0
WARNING: Conflicting installations:
foam settings: /home/joshi/OpenFOAM/linux/gcc-4.1.0/bin/gcc
current path : /usr/bin/gcc
CRITICAL ERROR
I check the following to make sure my PATH is correct
echo $PATH
/home/joshi/OpenFOAM/OpenFOAM-1.3/src/lam-7.1.1/platforms/linuxGcc4DPOpt/bin:/ho me/joshi/OpenFOAM/OpenFOAM-1.3/src/mico-2.3.11/platforms/linuxGcc4DPOpt/bin:/hom e/joshi/OpenFOAM/linux/j2sdk1.4.2_05/bin:/home/joshi/OpenFOAM/linux/gcc-4.1.0/bi n:/home/joshi/OpenFOAM/linux/gcc-4.1.0/../gdb-6.4/bin:/home/joshi/OpenFOAM/joshi -1.3/applications/bin/linuxGcc4DPOpt:/home/joshi/OpenFOAM/OpenFOAM-1.3/applicati ons/bin/linuxGcc4DPOpt:/home/joshi/OpenFOAM/OpenFOAM-1.3/wmake:/home/joshi/OpenF OAM/OpenFOAM-1.3/bin:/home/joshi/OpenFOAM/linux/bin:/home/joshi/OpenFOAM/OpenFOA M-1.3/src/lam-7.1.1/platforms/linuxGcc4DPOpt/bin:/home/joshi/OpenFOAM/OpenFOAM-1 .3/src/mico-2.3.11/platforms/linuxGcc4DPOpt/bin:/home/joshi/OpenFOAM/linux/j2sdk 1.4.2_05/bin:/home/joshi/OpenFOAM/linux/gcc-4.1.0/bin:/home/joshi/OpenFOAM/joshi -1.3/applications/bin/linuxGcc4DPOpt:/home/joshi/OpenFOAM/OpenFOAM-1.3/applicati ons/bin/linuxGcc4DPOpt:/home/joshi/OpenFOAM/OpenFOAM-1.3/wmake:/home/joshi/OpenF OAM/OpenFOAM-1.3/bin:/usr/local/bin:/usr/bin:/home/joshi/bin:/usr/X11R6/bin:/bin :/usr/games:/opt/gnome/bin:/opt/kde3/bin:/opt/cross/bin:/usr/lib/qt3/bin:/home/j oshi/OpenFOAM/linux/paraview-2.4.2/bin
  Reply With Quote

Old   December 2, 2006, 11:46
Default I'm getting a similar error:
  #7
New Member
 
Alejandro Molina
Join Date: Mar 2009
Posts: 4
Rep Power: 17
amolinao is on a distinguished road
I'm getting a similar error:

Software versions
-------------------------------------------------------------------------------
Software Version Location
-------------------------------------------------------------------------------
gcc 3.4.5
WARNING: Conflicting installations:
foam settings: /home/amolinao/OpenFOAM/linux/gcc-4.1.0-64/bin/gcc
current path : /usr/bin/gcc
CRITICAL ERROR


Any suggestions?
amolinao is offline   Reply With Quote

Old   December 2, 2006, 11:50
Default I'm getting a similar error:
  #8
New Member
 
Alejandro Molina
Join Date: Mar 2009
Posts: 4
Rep Power: 17
amolinao is on a distinguished road
I'm getting a similar error:

Software versions
-------------------------------------------------------------------------------
Software Version Location
-------------------------------------------------------------------------------
gcc 3.4.5
WARNING: Conflicting installations:
foam settings: /home/amolinao/OpenFOAM/linux/gcc-4.1.0-64/bin/gcc
current path : /usr/bin/gcc
CRITICAL ERROR


Any suggestions?
amolinao is offline   Reply With Quote

Old   January 3, 2007, 07:10
Default Similar error again.. Softw
  #9
New Member
 
Altair Engineering Ltd
Join Date: Mar 2009
Posts: 4
Rep Power: 17
altair is on a distinguished road
Similar error again..

Software versions
-------------------------------------------------------------------------------
Software Version Location
-------------------------------------------------------------------------------
gcc *** not installed ***
CRITICAL ERROR

any suggestions?
altair is offline   Reply With Quote

Old   January 3, 2007, 07:16
Default Similar error again.. Softw
  #10
New Member
 
Altair Engineering Ltd
Join Date: Mar 2009
Posts: 4
Rep Power: 17
altair is on a distinguished road
Similar error again..

Software versions
-------------------------------------------------------------------------------
Software Version Location
-------------------------------------------------------------------------------
gcc *** not installed ***
CRITICAL ERROR

any suggestions?
altair is offline   Reply With Quote

Old   January 3, 2007, 08:58
Default Hello all, The error mentio
  #11
New Member
 
Altair Engineering Ltd
Join Date: Mar 2009
Posts: 4
Rep Power: 17
altair is on a distinguished road
Hello all,

The error mentioned is now sorted out.
The issue was in the foam settings referring to gcc binaries within 'linux' directory under OpenFOAM that dint exist. So creating a directory named 'linux' and moving the gcc binaries as well as the java bits in there solved the problem.

Thanks and regards..
altair is offline   Reply With Quote

Old   January 3, 2007, 09:01
Default Hello all, The error mentio
  #12
New Member
 
Altair Engineering Ltd
Join Date: Mar 2009
Posts: 4
Rep Power: 17
altair is on a distinguished road
Hello all,

The error mentioned is now sorted out.
The issue was in the foam settings referring to gcc binaries within 'linux' directory under OpenFOAM that dint exist. So creating a directory named 'linux' and moving the gcc binaries as well as the java bits in there solved the problem.

Thanks and regards..
altair is offline   Reply With Quote

Old   June 22, 2007, 05:07
Default Hej, I have the same proble
  #13
mss
Guest
 
Posts: n/a
Hej,

I have the same problem (with OpenFOAM-1.4 on SuSe 10.2) :
-------------------------------------------------------------------------------
gcc ...figure
WARNING: Conflicting installations:
foam settings: /home/alex/OpenFOAM/linux64/gcc-4.1.2/bin/gcc
current path : /usr/bin/gcc
CRITICAL ERROR

java 1.5.0_10
WARNING: Conflicting installations:
foam settings: /home/alex/OpenFOAM/linux64/j2sdk1.4.2_05/bin/java
current path : /usr/bin/java

gzip 1.3.5 /usr/bin/gzip
tar 1.3.5 /bin/tar
icoFoam ...OpenFOAM-1.4/applications/bin/linux64Gcc4DPOpt/icoFoam
-------------------------------------------------------------------------------

Could someone help me?

Thank you,
Rita
  Reply With Quote

Old   July 9, 2007, 09:31
Default Hello, just for documentati
  #14
Member
 
Thomas Wolfanger
Join Date: Mar 2009
Location: South West Germany
Posts: 62
Rep Power: 17
anger is on a distinguished road
Hello,

just for documentation purposes: I had the same problem about the conflicting installations of gcc on a SLES 9.3 system.
I noticed that the path to the gcc which should be used by FOAM (found after the keyword "foam settings") was not present which seems to be the problem; actually, this line mentioning the gcc is misleading because one could think that FOAM actually has found the compiler, while it did not.
So there are two soutions to this problem: putting the compiler into the right place (i.e. into the path mentioned in the line "foam settings") or changing the bashrc (or cshrc) in a way to point to the correct location. My problem was resolved by using the first solution.

Regards,
-Thomas
anger is offline   Reply With Quote

Old   October 5, 2007, 00:27
Default Hello All, I have read this
  #15
Member
 
Shaun Cooper
Join Date: Mar 2009
Posts: 54
Rep Power: 17
coops is on a distinguished road
Hello All,

I have read this thread and some others but I can't seem to get it right! I have installed OpenFOAM on 32 bit before but this is my first time with 64-bit. I have the following issue from foamInstallationTest

gcc 4.1.2
WARNING: Conflicting installations:
foam settings: /home/model/OpenFOAM/linux/gcc-4.2.1-64/bin/gcc
current path : /usr/lib64/ccache/gcc
CRITICAL ERROR

I have put the files in the following positions:

/home/model/OpenFOAM/
for OpenFOAM General and DP Precison

and

/home/model/OpenFOAM/linux64/
for paraview and gcc respectively. (as suggested on the download website. I'm not using FoamX so no java)

My .bashrc file reads:

# .bashrc

# Source global definitions
if [ -f /etc/bashrc ]; then
. /etc/bashrc
fi

# User specific aliases and functions

export WM64=1

. $HOME/OpenFOAM/OpenFOAM-1.4.1/.OpenFOAM-1.4.1/bashrc

Can someone tell me if a) the .bashrc is right. b) how to get around the gcc problem c) (I think this is related to b)) the paraview command is not recognised. It may not be getting the right directory (like gcc) but I am not sure.

I hope this hasn't been covered before (I did search!)

Thanks in advance,

Shaun
coops is offline   Reply With Quote

Old   October 5, 2007, 02:30
Default Hi Shaun, I suspect the probl
  #16
Senior Member
 
dmoroian's Avatar
 
Dragos
Join Date: Mar 2009
Posts: 648
Rep Power: 20
dmoroian is on a distinguished road
Hi Shaun,
I suspect the problem resides in your WM_64, environment variable, which most probably you did not set. This is why you have the wrong path towards your compiler (/home/model/OpenFOAM/linux/gcc-4.2.1-64/bin/gcc instead of /home/model/OpenFOAM/linux64/gcc-4.2.1-64/bin/gcc)
Solution: in OpenFOAM/OpenFOAM-1.4.1/.OpenFOAM-1.4.1/basrc
include the following line just before line 98:
export WM_64=shaun

I hope this will be useful,
Dragos
dmoroian is offline   Reply With Quote

Old   October 5, 2007, 03:23
Default Hi Dragos, Thankyou very mu
  #17
Member
 
Shaun Cooper
Join Date: Mar 2009
Posts: 54
Rep Power: 17
coops is on a distinguished road
Hi Dragos,

Thankyou very much! I need to learn to read properly! I changed that and the foamInstallationTest says everything is fine now. I will just have to wait for my collegue to test it for me. I installed it on a machine in alaska from my machine in australia.

Thanks again

Shaun
coops is offline   Reply With Quote

Reply


Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are On
Refbacks are On


Similar Threads
Thread Thread Starter Forum Replies Last Post
Conflicting installation of c yejungong OpenFOAM Installation 0 March 26, 2008 11:44
Conflicting variables shuo OpenFOAM Running, Solving & CFD 0 October 15, 2006 22:40
[OpenFOAM] ParaFoam conflicting version of paraview xponticq ParaView 3 May 16, 2006 13:52
1 critical error GCC Conflicting installations atzaru OpenFOAM Installation 6 April 23, 2006 14:50


All times are GMT -4. The time now is 23:51.