[arieljeds]

Hi,

I'm running a simulation of free surface flow around a cylinder. My computational domain is x = 300m (6*wavelength), y = {1L; 1L} and z (depth) = {15m; 15m}. I am using relaxation zones that are 1.5*L at the inlet and outlet. I'm running these simulations on a cluster using 24 processors. My simulation runs for a while and then I get a really long error that I don't understand. Has anyone had the following error before?? I'm using a deltaT of 1e-07

PIMPLE: iteration 1
smoothSolver:  Solving for alpha.water, Initial residual = 0.000143121, Final residual = 1.29047e-10, No Iterations 2
Phase-1 volume fraction = 0.499739  Min(alpha.water) = 0  Max(alpha.water) = 1.00001
MULES: Correcting alpha.water
Phase-1 volume fraction = 0.499739  Min(alpha.water) = 0  Max(alpha.water) = 1.00001
Relaxing time: 0.11 s
DILUPBiCG:  Solving for Ux, Initial residual = 0.0199691, Final residual = 2.09363e-10, No Iterations 4
DILUPBiCG:  Solving for Uy, Initial residual = 0.018773, Final residual = 5.11329e-10, No Iterations 4
[0] #0  [1] #0  [4] #0  [8] #0  Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[2] #0  Foam::error::printStack(Foam::Ostream&)[3] #0  Foam::error::printStack(Foam::Ostream&)[5] #0  Foam::error::printStack(Foam::Ostream&)[6] #0  Foam::error::printStack(Foam::Ostream&)[7] #0  Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[9] #0  Foam::error::printStack(Foam::Ostream&)[10] #0  Foam::error::printStack(Foam::Ostream&)[11] #0  Foam::error::printStack(Foam::Ostream&)[12] #0  Foam::error::printStack(Foam::Ostream&)[13] #0  Foam::error::printStack(Foam::Ostream&)[14] #0  Foam::error::printStack(Foam::Ostream&)[15] #0  Foam::error::printStack(Foam::Ostream&)[16] #0  Foam::error::printStack(Foam::Ostream&)[17] #0  Foam::error::printStack(Foam::Ostream&)[18] #0  Foam::error::printStack(Foam::Ostream&)[19] #0  Foam::error::printStack(Foam::Ostream&)[20] #0  Foam::error::printStack(Foam::Ostream&)[21] #0  Foam::error::printStack(Foam::Ostream&)[22] #0  Foam::error::printStack(Foam::Ostream&)[23] #0  Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&) at ??:?
[16] #1  Foam::sigFpe::sigHandler(int) at ??:?
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[23] #1  Foam::sigFpe::sigHandler(int)[12] #1  Foam::sigFpe::sigHandler(int) at ??:?
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[22] #1  Foam::sigFpe::sigHandler(int)[15] #1  [14] #1  Foam::sigFpe::sigHandler(int)Foam::sigFpe::sigHandler(int)[13] #1  Foam::sigFpe::sigHandler(int)[20] #1  Foam::sigFpe::sigHandler(int)[21] #1  Foam::sigFpe::sigHandler(int)[18] #1  Foam::sigFpe::sigHandler(int)[19] #1  Foam::sigFpe::sigHandler(int) at ??:?
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  Foam::sigFpe::sigHandler(int)[4] #1  Foam::sigFpe::sigHandler(int)[5] #1  Foam::sigFpe::sigHandler(int)[7] #1  Foam::sigFpe::sigHandler(int)[0] #1  Foam::sigFpe::sigHandler(int)[6] #1  Foam::sigFpe::sigHandler(int)[9] #1  Foam::sigFpe::sigHandler(int)[10] #1  Foam::sigFpe::sigHandler(int)[2] #1  Foam::sigFpe::sigHandler(int)[3] #1  Foam::sigFpe::sigHandler(int)[8] #1  Foam::sigFpe::sigHandler(int)[11] #1  Foam::sigFpe::sigHandler(int) at ??:?
[17] #1  Foam::sigFpe::sigHandler(int) at ??:?
[13] #2  ? at ??:?
[22] #2  ? at ??:?
[23] #2  ? at ??:?
[16] #2  ? at ??:?
[21] #2  ? at ??:?
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[3] #2  [9] #2  ?? at ??:?
[1] #2  ? at ??:?
[11] #2  ? at ??:?
[10] # at ??:?
[8] #2  ?2  ? in "/lib64/libpthread.so.0"
 in "/lib64/libpthread.so.0" in "/lib64/lib
 in "/lib64/libpthread.so.0"
 in "/lib64/libpthread.so.0"
pthread.so.0"
 in "/lib64/libpt in "/lib6hread.so.0"
4/libpthread.so.0"
 at ??:?
[0] #2  ?[12] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[13] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[15] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[16] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[21] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[22] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[23] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
 in "/lib64/libpthread.so.0"
[14] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[19] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[20] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[18] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[17] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[6] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[7] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[4] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[2] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[3] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[9] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[10] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[11] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
 in  in ""/lib64/libpthread.so.0"
/lib64/libpthread.so.0"
[8] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[1] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[5] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[0] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const at ??:?
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[1] #7  mainmainmainmainmainmainmainmainmainmainmainmain at ??:?
[0] #7  mainmainmainmainmainmainmainmainmainmainmain at ??:?
[22] #8  __libc_start_main at ??:?
[15] #8  __libc_start_main at ??:?
[23] #8  __libc_start_main at ??:?
[13] #8  __libc_start_main at ??:?
[14] #8  __libc_start_main at ??:?
[21] #8  __libc_start_main at ??:?
[16] #8  __libc_start_mainmain at ??:?
[18] #8  __libc_start_main at ??:?
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[19] #8  __libc_start_main at ??:?
[20] #8  __libc_start_main at ??:?
[17] #8  __libc_start_main at ??:?
[6] #8  __libc_start_main at ??:?
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[4] #8  __libc_start_main at ??:?
[10] #8  __libc_start_main at ??:?
[3] #8  __libc_start_main at ??:?
[9] #8  __libc_start_main at ??:?
[11] #8  __libc_start_main at ??:?
[5] #8  __libc_start_main at ??:?
[1] #8  __libc_start_main at ??:?
[8] #8  __libc_start_main in "/lib64/libc.so.6"
 in "/lib64/libc.so.6"
[23] #9   in "/lib64/libc.so.6"
[15] #9  [22] #9   in "/lib64/libc.so.6"
[13] #9   in "/lib64/libc.so.6"
[14] #9   in "/lib64/libc.so.6"
[21] #9   in "/lib64/libc.so.6"
[18] #9   in "/lib64/libc.so.6"
[16] #9   in "/lib64/libc.so.6"
 in "/lib64/libc.so.6"
[20] #9  [12] #9   in "/lib64/libc.so.6"
 in "/lib64/libc.so.6"
[19] #9  [17] #9   at ??:?
[0] #8  __libc_start_main in "/lib64/libc.so.6"
[6] #9   in "/lib64/libc.so.6"
[2] #9   in "/lib64/libc.so.6"
[7] #9   in "/lib64/libc.so.6"
[4] #9   in "/lib64/libc.so.6"
[10] #9   in "/lib64/libc.so.6"
[3] #9   in "/lib64/libc.so.6"
[9] #9   in "/lib64/libc.so.6"
[11] #9   in "/lib64/libc.so.6"
[5] #9  ??? in "/lib64/libc.so.6"
[1] #9   in "/lib64/libc.so.6"
[8] #9  ????????????? in "/lib64/libc.so.6"
[0] #9  ??????? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
APPLICATION TERMINATED WITH THE EXIT STRING: Floating point exception (signal 8)

[arieljeds]

Hi all, I posted a similar question a few weeks ago but haven' solved the problem yet. I am running a simulation of free surface flow around a surface piercing cylinder using stokes first waves. My simulation appears to go ok for a while and then I get the following error:

PIMPLE: iteration 1
smoothSolver:  Solving for alpha.water, Initial residual = 0.000172949, Final residual = 1.53153e-09, No Iterations 2
Phase-1 volume fraction = 0.499764  Min(alpha.water) = 0  Max(alpha.water) = 1
MULES: Correcting alpha.water
Phase-1 volume fraction = 0.499764  Min(alpha.water) = 0  Max(alpha.water) = 1
Relaxing time: 0.23 s
DILUPBiCG:  Solving for Ux, Initial residual = 0.0110665, Final residual = 5.33006e-10, No Iterations 4
DILUPBiCG:  Solving for Uy, Initial residual = 0.0107912, Final residual = 6.13509e-11, No Iterations 4
[0] #0  [1] #0  [2] #0  [3] #0  [4] #0  [5] #0  [6] #0  [7] #0  [8] #0  [9] #0  [10] #0  [11] #0  Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&) at ??:?
 at ??:?
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 at ??:?
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 at ??:?
[5] #1   at ??:?
Foam::sigFpe::sigHandler(int)[6] #1  [9] #1  Foam::sigFpe::sigHandler(int)[1] #1  Foam::sigFpe::sigHandler(int)Foam::sigFpe::sigHandler(int)[7] #1  [11] #1  Foam::sigFpe::sigHandler(int)[10] #1  Foam::sigFpe::sigHandler(int)Foam::sigFpe::sigHandler(int)[3] #1  Foam::sigFpe::sigHandler(int)[0] #1  [4] #1  [8] #1  Foam::sigFpe::sigHandler(int)[2] #1  Foam::sigFpe::sigHandler(int)Foam::sigFpe::sigHandler(int)Foam::sigFpe::sigHandler(int) at ??:?
[10] #2 at ??:?
[8] #2  ?  ? at ??:?
[1] #2  ? at ??:?
[5] #2  ? at ??:?
[11] #2  ? at ??:?
[6] #2  ? at ??:?
[7] #2  ? at ??:?
[9] #2  ? at ??:?
[3] #2  ? at ??:?
[2] #2  ? at ??:?
[4] #2  ? at ??:?
[0] #2  ? in "/lib64/libpthread.so in "/lib64/libpthread.so.0"
.0"
[8] #3  [10] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) constFoam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
 in "/lib64/libpthread.so.0"
[1] #3  [5] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) constFoam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[7] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[9] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
 in "/lib64/libpthread.so.0"
[6] #3   in Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const"/lib64/libpthread.so.0"
 in "/lib64/libpthre[11] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) constad.so.0"
 in "/lib64/libpthread.so.0"
[2] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[3] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const[4] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib64/libpthread.so.0"
[0] #3  Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const at ??:?
 at ??:?
[10] #4  [8] #4   at ??:?
[1] #4   at ??:?
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[4] #4  [11] #4  ?? at ??:?
[0] #4  ?????????? at ??:?
[10] #5   at ??:?
[6] #5   at ??:?
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[4] #5  [7] #5   at ??:?
[11] # at ??:?
[2] #5  [3] #5   at ??:?
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[9] #5  5  [0] #5   at ??:?
[1] #5  [5] #5   at ??:?
[8] #5  ???????????? at ??:?
[10] #6   at ??:?
[8] #6   at ??:?
[7] #6   at ??:?
[6] #6   at ??:?
[9] #6  ? at ??:?
[11] #6  ? at ??:?
[1] #6   at ??:?
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[3] #6   at ??:?
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[2] #6   at ??:?
[0] #6  ??? at ??:?
[10] #7  ??????? at ??:?
[8] #7   at ??:?
[7] #7   at ??:?
[6] #7   at ??:?
[9] #7  main at ??:?
[11] #7  mainmainmainmain at ??:?
[1] #7   at ??:?
 at [5] #7  ??:?
[2] #7   at ??:?
[3] #7   at ??:?
[4] #7   at ??:?
[0] #7   at ??:?
[10] #8  __libc_start_mainmain at ??:?
[8] #8  __libc_start_main at ??:?
[7] #8  __libc_start_mainmainmainmain at ??:?
[6] #8  __libc_start_main at ??:?
[9] #8  __libc_start_mainmainmainmain in "/lib64/libc.so.6"
[10] #9   at ??:?
[11] #8  __libc_start_main in "/lib64/libc.so.6"
[8] #9   in "/lib64/libc.so.6"
[7] #9   at ??:?
[1] #8  __libc_start_main? at ??:?
[5] #8  __libc_start_main at ??:?
[3] #8  __libc_start_main at ??:?
[4] #8  __libc_start_main in "/lib64/libc.so.6"
 in "/lib64/libc.so.6"
[9] #9  [6] #9   at ??:?
[2] #8  __libc_start_main in "/lib64/libc.so.6"
[11] #9   at ??:?
[0] #8  __libc_start_main?? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 in "/lib64/libc.so.6"
[1] #9  ?? in "/lib64/libc.so.6"
[5] #9   in "/lib64/libc?.so.6"
[3] #9   in "/lib64/libc.so.6"
[2] #9   in "/lib64/libc.so.6"
[4] #9   at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 in "/lib64/libc.so.6"
[0] #9   at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
?? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
?? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
? at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
 at /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:116
APPLICATION TERMINATED WITH THE EXIT STRING: Floating point exception (signal 8)

I can't see where the problem is?? Any advice??



EDIT: Ok I discovered thsi was not a waves2foam error: related to the HPC I was using and running out of time on it!