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[swak4Foam] Problem with swak4Foam and OpenFOAM 2.3.1

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Old   February 25, 2017, 10:16
Default Problem with swak4Foam and OpenFOAM 2.3.1
  #1
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behzad Ghasemi
Join Date: Sep 2013
Location: Iran
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Quote:
Originally Posted by wyldckat View Post
Greetings Rafael,

Wow, I wasn't aware about this issue in OpenFOAM 2.2... I've reported this and provided a fix for swak4Foam 0.3.2 just now: https://sourceforge.net/p/openfoam-e...swak4foam/228/

The file in attachment should help, as it's the patch provided in the bug report. To apply it, do the following steps:
  1. Download the attached file "writeFieldsGeneralFunctionObject.C.patch".
  2. In the terminal, go to the folder where you have the swak4Foam source code and run the following command:
    Code:
    patch -p1 < ~/Downloads/writeFieldsGeneralFunctionObject.C.patch
    Where I'm assuming you downloaded the file into the folder "~/Downloads/", so change it to your need
  3. Now you can run "Allwmake" once again, as you did before.
Best regards,
Bruno
Hi Bruno,

I have same problem with installing SWAK 0.4.0 on OF-2.3.1. First i installed the SWAK and didn't noticed the error in end of the log file i attached here.
Code:
Previously compiled for OpenFOAM 2.3.1

/home/behzad/OpenFOAM/behzad-2.3.1/swak4Foam/privateRequirements/bin existing. Prepending to PATH-variable (private version of Bison)

Reading variables from 'swakConfiguration'
swakConfiguration: line 13: [: : integer expression expected
Checking swak4Foam-version and generating file
abort: no repository found in '/home/behzad/OpenFOAM/behzad-2.3.1/swak4Foam' (.hg not found)!
Swak version is 0.4.0
Bison is version 2.7.12-4996
Flex is version 2.5.39 (Minor version: 39)
OpenFOAM-version: Major 2 Minor 3 Patch 1 (-1 == x / 1) Fork: openfoam
No change to swak4FoamParsers/foamVersion4swak.H
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswak4FoamParsers.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakLagrangianParser.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libgroovyBC.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakFunctionObjects.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libsimpleFunctionObjects.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libsimpleLagrangianFunctionObjects.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libsimpleSearchableSurfaces.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libsimpleSwakFunctionObjects.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakTopoSources.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakSourceFields.so' is up to date.
Compiling swakFvOptions
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakFvOptions.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libgroovyStandardBCs.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakPythonIntegration.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakChemistryModelFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakDynamicMeshFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakFvcSchemesFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakLagrangianCloudSourcesFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakLocalCalculationsFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakMeshQualityFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakMeshWaveFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakMRFFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakRadiationModelFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakRandomFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakSurfacesAndSetsFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakThermoTurbFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakTransportTurbFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakVelocityFunctionPlugin.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakCoalCloudAdaptor.so' is up to date.

If you have your own function-plugins you can specify them using the SWAK_USER_PLUGINS environment variable and they would be compiled now. If you don't know what this means: don't bother. You propably don't need it

'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libsimpleCloudFunctionObjects.so' is up to date.
'/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib/libswakCloudFunctionObjects.so' is up to date.
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/funkyPythonPostproc' is up to date.
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -IMake/linux64GccDPOpt  -I/opt/openfoam231/src/finiteVolume/lnInclude -I/opt/openfoam231/src/sampling/lnInclude -I/opt/openfoam231/src/meshTools/lnInclude -I../../Libraries/simpleFunctionObjects/lnInclude/ -I../../Libraries/swak4FoamParsers/lnInclude/  -IlnInclude -I. -I/opt/openfoam231/src/OpenFOAM/lnInclude -I/opt/openfoam231/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/fieldReport.o -L/opt/openfoam231/platforms/linux64GccDPOpt/lib \
         -lfiniteVolume     -lmeshTools     -L/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/lib     -lswak4FoamParsers -lOpenFOAM -ldl   -lm -o /home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/fieldReport
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/calcNonUniformOffsetsForMapped' is up to date.
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/funkyDoCalc' is up to date.
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/funkySetBoundaryField' is up to date.
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/funkySetFields' is up to date.
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/funkySetLagrangianField' is up to date.
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/replayTransientBC' is up to date.
Make/linux64GccDPOpt/fieldReport.o: In function `void reportValues<double>(Foam::word const&, Foam::fvMesh const&, Foam::CommonValueExpressionDriver&, Foam::string const&)':
fieldReport.C:(.text._Z12reportValuesIdEvRKN4Foam4wordERKNS0_6fvMeshERNS0_27CommonValueExpressionDriverERKNS0_6stringE[_Z12reportValuesIdEvRKN4Foam4wordERKNS0_6fvMeshERNS0_27CommonValueExpressionDriverERKNS0_6stringE]+0x55): undefined reference to `Foam::CommonValueExpressionDriver::addAlias(Foam::word const&, Foam::word const&, bool)'
Make/linux64GccDPOpt/fieldReport.o: In function `void reportValues<Foam::Vector<double> >(Foam::word const&, Foam::fvMesh const&, Foam::CommonValueExpressionDriver&, Foam::string const&)':
fieldReport.C:(.text._Z12reportValuesIN4Foam6VectorIdEEEvRKNS0_4wordERKNS0_6fvMeshERNS0_27CommonValueExpressionDriverERKNS0_6stringE[_Z12reportValuesIN4Foam6VectorIdEEEvRKNS0_4wordERKNS0_6fvMeshERNS0_27CommonValueExpressionDriverERKNS0_6stringE]+0x55): undefined reference to `Foam::CommonValueExpressionDriver::addAlias(Foam::word const&, Foam::word const&, bool)'
collect2: error: ld returned 1 exit status
make[1]: *** [/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/fieldReport] Error 1
make: *** [fieldReport] Error 2
make[1]: `/home/behzad/OpenFOAM/behzad-2.3.1/platforms/linux64GccDPOpt/bin/funkyWarpMesh' is up to date.
make: Target `application' not remade because of errors.


If you want to use swakCoded-function object or compile software based on swak set the environment variable SWAK4FOAM_SRC to /home/behzad/OpenFOAM/behzad-2.3.1/swak4Foam/Libraries (most people will be fine without setting that variable)
When i tried to run decomposePar i got warnings attached:

Although your patch was for previous version, i applied it and nothing changed.

Thanks in advance,
Attached Files
File Type: txt decomposPar Error.txt (15.0 KB, 4 views)
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Old   March 2, 2017, 06:58
Default Problem with swak4Foam and OpenFOAM 2.3.1
  #2
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behzad Ghasemi
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Hi dear forumers,

I want to calculate falling droplet velocity using swak expresions. but when I want to decompose the domain or execute the solver i get error.
my bison version is:
Code:
bison (GNU Bison) 2.7.12-4996
my swak version is 0.4.0. I use OF-2.3.1.
My controlDict added codes for swak:
Code:
libs (
    "libOpenFOAM.so" // keeps paraFoam happy
    "libtwoPhaseProperties.so"
    "libtwoPhaseInterfaceProperties.so"
    "libinterfaceProperties.so"
    "libsimpleSwakFunctionObjects.so"
    "libswakFunctionObjects.so"
);

functions
(

    DropY
    {
        aliases {
        alphawater alpha.water;
        }
       ignore_unimplemented_simpleFunctionObject::movePoints true;
        type swakExpression;
        valueType internalField;
        verbose true;
        variables (
        "Vol= sum (alphawater < 0.5 ? vol() : 0);"
        "VolY= sum (alphawater < 0.5 ? pos().y*vol() : 0);"
            );
        expression "VolY/Vol";
        accumulations (

            min
        );        
    }
   
   createInterface
    {
        ignore_unimplemented_simpleFunctionObject::movePoints true;
        type createSampledSurface;
        outputControl timeStep;
        outputInterval 1;
        surfaceName interface;
        surface {
            type isoSurface;
            isoField alphawater;
            isoValue 0.5;
            interpolate true;
        }
}
    
    height
    {
        ignore_unimplemented_simpleFunctionObject::movePoints true;
        type swakExpression;
        valueType surface;
        surfaceName interface;
        verbose true;
        expression "pos().y";
        accumulations (
            min
            max
        );
    }
  
    surface
    {
        ignore_unimplemented_simpleFunctionObject::movePoints true;
        type swakExpression;
        valueType surface;
        surfaceName interface;
        verbose true;
        expression "area()";
        accumulations (
            sum
        );
    }
    deviation
    {
        ignore_unimplemented_simpleFunctionObject::movePoints true;
        type swakExpression;
        valueType surface;
        surfaceName interface;
        verbose true;
        expression "pow(pos().y-yAvg,2)*area()/sum(area())";
        variables "yAvg=sum(pos().y*area())/sum(area());";
        accumulations (
            sum
        );
    }
    velocity
    {
        ignore_unimplemented_simpleFunctionObject::movePoints true;
        type swakExpression;
        valueType surface;
        surfaceName interface;
        verbose true;
        expression "mag(U)";
        accumulations (
            max
        );
    }
    swakSurfInterface
    {
        ignore_unimplemented_simpleFunctionObject::movePoints true;
        type surfaces;
        outputControl outputTime;
        //        outputControl timeStep;
        outputInterval 1;
        fields ( U );
        surfaceFormat vtk;
        surfaces (
            interface {
                type swakRegistryProxy;
                surfaceName interface;
            }
        );
        interpolationScheme nix;
    }
   
    DropDownVelocity
    {
        
      aliases {
        alphawater alpha.water;
        }

        type swakExpression;
        valueType internalField;
        variables (
             "downDirection=vector(0,-1,0);"//select the downwards direction
             "thres=0.5;"//which cells to keep
             "liquidVol= sum(alphawater > thres ? vol() : 0);" //calculates the volume of the drop
             "downVel= alphawater > thres ? (U & downDirection) : 0;" //a & b:inner vector product. Keep the y component of U.
        );
        expression "downVel*vol()/liquidVol";//vol():vol of the cell
        accumulations (
           sum
        );
        
        verbose true;
    }
    
);
I attached swak make log and solver execution error below.

any comment is appreciated,
regards,
Attached Files
File Type: txt log.txt (7.3 KB, 7 views)
File Type: txt Error.txt (8.8 KB, 11 views)
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Old   March 7, 2017, 09:31
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behzad Ghasemi
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According to attached Error.txt file, the shared object libtwoPhaseInterfaceProperties.so isn't exist in openFoam library any more. maybe there was in older versions, now i have two questions:

1- Do i need libtwoPhaseInterfaceProperties.so for creating and tracking droplet interface or only libinterfaceProperties.so will suffice?
2- If i need libtwoPhaseInterfaceProperties.so, can i add this to openFoam library? and how?

Any comment is appreciated,
Kind regards,

Last edited by behzad-cfd; March 7, 2017 at 18:01.
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Old   March 16, 2017, 10:22
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No one have an idea?
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Old   March 25, 2017, 17:19
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Bruno Santos
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wyldckat is a name known to allwyldckat is a name known to allwyldckat is a name known to allwyldckat is a name known to allwyldckat is a name known to allwyldckat is a name known to all
Greetings Behzad,

I've finally managed to take a quick look into this and I have to say that I'm a bit confused, mostly because I'm not familiar with the reason why you're loading all of those libraries in the "libs" list within "controlDict".

As for the log file from the installation, only fieldReport didn't build, so this shouldn't affect your case.

Therefore, to address the problem, I suggest that you change the "libs" entry to this:
Code:
libs (
    "libsimpleSwakFunctionObjects.so"
    "libswakFunctionObjects.so"
);
I suggest this because I don't see any reason why you need to load any other libraries than the ones that swak4Foam needs for the function objects to work as intended.

Of course this also means that you must only use these with the correct multiphase solver and do not try to use these function objects with an application such as execFlowFunctionObjects.

Best regards,
Bruno
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