[mohsen.boojari]

hi everyone,
I'm trying to run a test case in SOWFA package named (NREL5MWRef.uniformFlow)
but when i used the runscript of this case to start the simulation i got these errors:

cp: cannot stat `0.original': No such file or directory
cp: cannot stat `system/controlDict.1': No such file or directory
Running blockMesh
cp: cannot stat `constant/polyMesh/blockMeshDict': No such file or directory
mv: cannot stat `./blockMeshDict': No such file or directory

Also these ones:

--> FOAM FATAL IO ERROR: 
cannot find file

file: /home/mohsen/system/controlDict at line 0.

    From function regIOobject::readStream()
    in file db/regIOobject/regIOobjectRead.C at line 73.

All of the above mentioned files exist in the case File but i don't know why I'm seeing this.
I have attached the Script . please take a look at it .
thanks

#!/bin/bash
#PBS -l walltime=72:00:00
#PBS -l nodes=40
#PBS -A windFlowModeling
#PBS -W x="FLAGS:ADVRES:SOWFA.10113"

source $HOME/.bash_profile
OpenFOAM-2.0.x-gcc-impi
module list

cd $PBS_O_WORKDIR
nodes=40                             # Number of nodes
cores=24                             # Number MPI processes to start on each node; 8 cores/node



solver=pisoFoamTurbine


refineMeshLocal()
{
   i=$1
   while [ $i -gt 0 ]
   do
      echo "Performing level $i local refinement"
      echo "   selecting cells to refine..."
      cp system/topoSetDict.local.$i system/topoSetDict
      topoSet > log.topoSet.local.$i 2>&1

      echo "   refining cells..."
      cp system/refineMeshDict.local system/refineMeshDict
      refineMesh -dict -overwrite > log.refineMesh.local.$i 2>&1

      let i=i-1
   done
}


refineMeshGlobal()
{
   i=1
   while [ $i -le $1 ]
   do
      echo "Performing level $i global refinement"
      echo "   refining cells..."
      mpirun -np $(($nodes*$cores)) refineMesh -parallel -overwrite > log.refineMesh.global.$i 2>&1

      let i=i+1
   done
}


echo "Starting OpenFOAM job at: " $(date)
echo "using " $(($nodes*$cores)) " processors"

# Get a clean version of the intial fields
rm -rf 0
cp -rf 0.original 0

# Copy the proper controlDict into place

cp system/controlDict.1 system/controlDict

# Make the background coarse mesh using blockMesh (serial)
echo "Running blockMesh"
cp constant/polyMesh/blockMeshDict ./
rm -rf constant/polyMesh/*
mv ./blockMeshDict constant/polyMesh
blockMesh > log.blockMesh 2>&1

# Perform local refinement (serial)
refineMeshLocal 3

# Decompose the mesh and solution files (serial)
echo "Running decomposePar"
cp system/decomposeParDict.$(($nodes*$cores)) system/decomposeParDict
decomposePar -cellDist -force > log.decomposePar

# Perform global refinement to desired resolution (parallel)
refineMeshGlobal 1

# Check the mesh.
mpirun -np $(($nodes*$cores)) checkMesh -parallel > log.checkMesh 2>&1

# Run the solver (parallel)
mpirun -np $(($nodes*$cores)) $solver -parallel > log.1.$solver 2>&1

echo "Ending OpenFOAM job at: " $(date)