CFD Online Logo CFD Online URL
www.cfd-online.com
[Sponsors]
Home > Forums > Software User Forums > OpenFOAM > OpenFOAM Community Contributions

[Helyx OS] Helyx-OS (GUI for SnappyHexMesh

Register Blogs Community New Posts Updated Threads Search

Like Tree44Likes

Reply
 
LinkBack Thread Tools Search this Thread Display Modes
Old   November 15, 2012, 00:00
Default
  #61
New Member
 
Chris R.
Join Date: Nov 2012
Posts: 2
Rep Power: 0
Raddy13 is on a distinguished road
I'm trying to do a basic cylindrical pipe flow computation to get the hang of the program, so I'm trying to create a cylinder in Helyx-OS and mesh it, and I get the same error message as plucas. Switching it to user-defined mesh still produces the error. Any thoughts?

Ubuntu 12.04, 64-bit
Raddy13 is offline   Reply With Quote

Old   November 15, 2012, 04:25
Default
  #62
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
Hi Raddy13/plucas,

As mentioned in a previous post, there are some issues affecting the mesh generation on Helyx-OS, in particular under UBUNTU. Can you try the following please?

1) Apply the following patch: http://sourceforge.net/p/helyx-os/tickets/41/
2) Edit the mesh.run script which resides on HelyxOS/v1.0.0/bin as follows:

#!/bin/sh
. /opt/openfoam211/etc/bashrc

# Absolute path to this script, e.g. /home/user/bin/foo.sh SCRIPT=`readlink -f $0` # Absolute path this script is in, thus /home/user/bin SCRIPTPATH=`dirname $SCRIPT` echo $SCRIPTPATH

BLOCK_RUN=$SCRIPTPATH/block.run
SNAPPY_RUN=$SCRIPTPATH/snappy.run

#if [ -z $2 ] || [ $2 == "false" ]; then
$BLOCK_RUN $1 && $SNAPPY_RUN $1 #else
# $SNAPPY_RUN $1
#fi

Make sure you replace "/opt/openfoam211" with the actual location of your OPENFOAM version. Once you are done save the script and restart Helyx-OS.

Let me know if this works.
pgeremia is offline   Reply With Quote

Old   November 15, 2012, 16:34
Default
  #63
New Member
 
Chris R.
Join Date: Nov 2012
Posts: 2
Rep Power: 0
Raddy13 is on a distinguished road
Thanks for the quick reply!

I edited the scripts as described, and now when I try to mesh, I get this error:

/opt/openfoam211/Engys/HelyxOS/v1.0.0/bin/mesh.run: 10: /opt/openfoam211/Engys/HelyxOS/v1.0.0/bin/mesh.run: /block.run: not found

But when I go into /opt/openfoam211/Engys/HelyxOS/v1.0.0/bin, block.run is most definitely there.

EDIT: To clarify, this error occurs whether I have automatic or user defined mesh selected.
Attached Images
File Type: png bin_002.png (28.1 KB, 44 views)
Raddy13 is offline   Reply With Quote

Old   November 16, 2012, 05:37
Default
  #64
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
It looks like there is something wrong with the enviroment. Could you upload the entire bin directory please?
pgeremia is offline   Reply With Quote

Old   November 20, 2012, 07:00
Default
  #65
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
Can you also try to add the following to both "mesh.run" and "mesh.parallel.run" scripts immediately after the "echo $SCRIPTPATH" line and re-run helyxOS.sh please?

export SCRIPTPATH=/opt/openfoam211/Engys/HelyxOS/v1.0.0/bin
pgeremia is offline   Reply With Quote

Old   December 6, 2012, 03:50
Default
  #66
New Member
 
Fergus
Join Date: Sep 2012
Location: Glasgow, UK
Posts: 23
Rep Power: 14
Jaggy_Snake is on a distinguished road
Hi, I was having the same problem as Raddy13 and plucas.

I followed your proposed fix to no avail.

I'm now getting this lot when I try to create mesh:

Code:
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 1: /home/fergus/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc: /opt/OpenFOAM-2.1.1/bin/foamEtcFile: not found
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 1: /home/fergus/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc: /opt/OpenFOAM-2.1.1/bin/foamEtcFile: not found
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 1: /home/fergus/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc: /opt/OpenFOAM-2.1.1/bin/foamEtcFile: not found
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 1: /home/fergus/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc: /opt/OpenFOAM-2.1.1/bin/foamCleanPath: not found
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 1: /home/fergus/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc: /opt/OpenFOAM-2.1.1/bin/foamCleanPath: not found
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 1: /home/fergus/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc: /opt/OpenFOAM-2.1.1/bin/foamCleanPath: not found
/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/mesh.run: 141: .: Can't open /opt/OpenFOAM-2.1.1/etc/config/settings.sh
Could you tell me where I might have meshed(messed, get it?) up?



Also, I have been fairly spamming the forum with questions recently, apologies but I'm new to OF and indeed linux but want (and need) to learn very quickly. Thanks in advance for any help
Jaggy_Snake is offline   Reply With Quote

Old   December 6, 2012, 08:14
Default
  #67
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
@plucas, Raddy13 and Jaggy_Snake,

Can you rename your bin directory to bin.old, extract the bin.tar.gz archive file attached in Engys/HelyxOS/v1.0.0 and try again please?
Attached Files
File Type: gz bin.tar.gz (1.4 KB, 23 views)
pgeremia is offline   Reply With Quote

Old   December 6, 2012, 23:41
Default
  #68
New Member
 
Fergus
Join Date: Sep 2012
Location: Glasgow, UK
Posts: 23
Rep Power: 14
Jaggy_Snake is on a distinguished road
So I make the patch.sh file

Code:
#!/bin/sh

for f in *.run ; do

awk 'NR==2{$0=". ~/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc" RS $0}1' $f > tmp.dat
mv tmp.dat $f

done
run chmod 755 patch.sh

Then edit mesh.run so it looks like this:
Code:
#!/bin/sh
. ~/OpenFOAM/OpenFOAM-2.1.1/etc/bashrc

# Absolute path to this script, e.g. /home/user/bin/foo.sh SCRIPT=`readlink -f $0` # Absolute path this script is in, thus /home/user/bin SCRIPTPATH=`dirname $SCRIPT` echo $SCRIPTPATH

BLOCK_RUN=$SCRIPTPATH/block.run
SNAPPY_RUN=$SCRIPTPATH/snappy.run

#if [ -z $2 ] || [ $2 == "false" ]; then
$BLOCK_RUN $1 && $SNAPPY_RUN $1 #else
# $SNAPPY_RUN $1
#fi
Can you see any mistakes in there?

When trying to mesh I'm getting a long list of stuff to the terminal which I'll post below:

Code:
java -Xms128m -Xmx1024m -jar ./lib/HelyxOS.jar
OpenGL Warning: Failed to connect to host. Make sure 3D acceleration is enabled for this VM.
^C#
# A fatal error has been detected by the Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x00007fb759313090, pid=4660, tid=140426304165632
#
# JRE version: 6.0_33-b04
# Java VM: Java HotSpot(TM) 64-Bit Server VM (20.8-b03 mixed mode linux-amd64 compressed oops)
# Problematic frame:
# C  [swrast_dri.so+0x399090]  _fini+0x265538
#
# An error report file with more information is saved as:
# /home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/hs_err_pid4660.log
#
# If you would like to submit a bug report, please visit:
#   http://java.sun.com/webapps/bugreport/crash.jsp
#
./helyxOS.sh: line 124:  4660 Aborted                 (core dumped) ${JAVA} ${LOCALEFLAG} ${JFLAG} ${XFLAG} ${HELYXJAR} ${HELYXARG} ${VERBOSITY_LEVEL} $@ 1>&2
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ clear

fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ 
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ 
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ cd ~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin$ ./chmod 755 
bash: ./chmod: No such file or directory
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin$ cd ~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ ./helyxOS.sh
java -Xms128m -Xmx1024m -jar ./lib/HelyxOS.jar
OpenGL Warning: Failed to connect to host. Make sure 3D acceleration is enabled for this VM.
Stl.addBox(): box min [10000.0, -50000.0, 0.0], max [700000.0, 80000.0, 750000.0]
Stl.addBox(): box0 min [200000.0, 5000.0, 250000.0], max [550000.0, 40000.0, 500000.0]
Stl.addBox(): blockMeshBox min [9999.0, -50001.0, -1.0], max [700001.0, 80001.0, 750001.0]
GeometryActors.removeSurfaces() blockMeshBox
Stl.addBox(): blockMeshBox min [9999.0, -50001.0, -1.0], max [700001.0, 80001.0, 750001.0]
GeometryActors.removeSurfaces() blockMeshBox
Stl.addBox(): blockMeshBox min [9999.0, -50001.0, -1.0], max [700001.0, 80001.0, 750001.0]
WRITE: turbulenceProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/turbulenceProperties
WRITE: RASProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/RASProperties
WRITE: transportProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/transportProperties
WRITE: radiationProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/radiationProperties
WRITE: g -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/g
WRITE: MRFZones -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/MRFZones
WRITE: porousZones -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/porousZones
WRITE: blockMeshDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/blockMeshDict
WRITE: snappyHexMeshDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/snappyHexMeshDict
Dictionary is NULL
WRITE: controlDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/controlDict
WRITE: fvSchemes -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/fvSchemes
WRITE: fvSolution -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/fvSolution
### startMesher: [/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/xterm.mesh.run, /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx, false]
GeometryActors.removeSurfaces() blockMeshBox
WRITE: turbulenceProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/turbulenceProperties
WRITE: RASProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/RASProperties
WRITE: transportProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/transportProperties
WRITE: radiationProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/radiationProperties
WRITE: g -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/g
WRITE: MRFZones -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/MRFZones
WRITE: porousZones -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/porousZones
WRITE: blockMeshDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/blockMeshDict
WRITE: snappyHexMeshDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/snappyHexMeshDict
Dictionary is NULL
WRITE: controlDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/controlDict
WRITE: fvSchemes -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/fvSchemes
WRITE: fvSolution -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/fvSolution
### startMesher: [/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/xterm.mesh.run, /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx, true]
^C#
# A fatal error has been detected by the Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x00007f30cf985090, pid=4697, tid=139848470615808
#
# JRE version: 6.0_33-b04
# Java VM: Java HotSpot(TM) 64-Bit Server VM (20.8-b03 mixed mode linux-amd64 compressed oops)
# Problematic frame:
# C  [swrast_dri.so+0x399090]  _fini+0x265538
#
# An error report file with more information is saved as:
# /home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/hs_err_pid4697.log
#
# If you would like to submit a bug report, please visit:
#   http://java.sun.com/webapps/bugreport/crash.jsp
#
./helyxOS.sh: line 124:  4697 Aborted                 (core dumped) ${JAVA} ${LOCALEFLAG} ${JFLAG} ${XFLAG} ${HELYXJAR} ${HELYXARG} ${VERBOSITY_LEVEL} $@ 1>&2
fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ clear

fergus@fergus-VirtualBox:~/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0$ ./helyxOS.sh
java -Xms128m -Xmx1024m -jar ./lib/HelyxOS.jar
OpenGL Warning: Failed to connect to host. Make sure 3D acceleration is enabled for this VM.
Stl.addBox(): box min [10000.0, -50000.0, 0.0], max [700000.0, 80000.0, 750000.0]
Stl.addBox(): box0 min [200000.0, 5000.0, 250000.0], max [550000.0, 40000.0, 500000.0]
WRITE: turbulenceProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/turbulenceProperties
WRITE: RASProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/RASProperties
WRITE: transportProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/transportProperties
WRITE: radiationProperties -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/radiationProperties
WRITE: g -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/g
WRITE: MRFZones -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/MRFZones
WRITE: porousZones -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/constant/porousZones
WRITE: blockMeshDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/blockMeshDict
WRITE: snappyHexMeshDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/snappyHexMeshDict
Dictionary is NULL
WRITE: controlDict -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/controlDict
WRITE: fvSchemes -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/fvSchemes
WRITE: fvSolution -> /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx/system/fvSolution
### startMesher: [/home/fergus/OpenFOAM/OpenFOAM-2.1.1/Engys/HelyxOS/v1.0.0/bin/xterm.mesh.run, /home/fergus/OpenFOAM/fergus-2.1.1/run/1stAttemptHelyx, true]

This is so far beyond my abilities so thanks again for any help.

Last edited by Jaggy_Snake; December 7, 2012 at 00:23.
Jaggy_Snake is offline   Reply With Quote

Old   December 7, 2012, 08:13
Default
  #69
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
Hi,

You don't need to edit any script manually.

Simply donwload and install Helyx-OS from scratch, rename your bin directory to bin.old, extract the bin.tar.gz archive file attached in Engys/HelyxOS/v1.0.0 and try again.

Also, I noticed you are using Virtual Box and getting a Java error message: can you disable the 3D acceleration option when running the VM please?
pgeremia is offline   Reply With Quote

Old   December 8, 2012, 04:39
Default
  #70
New Member
 
Fergus
Join Date: Sep 2012
Location: Glasgow, UK
Posts: 23
Rep Power: 14
Jaggy_Snake is on a distinguished road
Sorry pgermia, have does as you said and it's the same original error.

Code:
--> FOAM FATAL ERROR: 
Cannot find file "points" in directory "polyMesh" in times 0 down to constant

    From function Time::findInstance(const fileName&, const word&, const IOobject::readOption, const word&)
    in file db/Time/findInstance.C at line 188.

FOAM exiting
[Also 3D acceleration has always been switched off as ParaView doesn't work for me with it on.]

Thanks for trying to solve this for us.
Jaggy_Snake is offline   Reply With Quote

Old   December 10, 2012, 05:26
Default
  #71
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
If you confirm that you removed your previous Helyx-OS installation, installed Helyx-OS from scratch and applied the bin.tar.gz patch and you get the same error, can you send the whole contents of the output log message which appear in the terminal window starting from the beginning? Also, can you confirm that the terminal which now opens on UBUNTU is gnome-terminal instead of xterm?
pgeremia is offline   Reply With Quote

Old   December 16, 2012, 10:16
Default
  #72
New Member
 
Fergus
Join Date: Sep 2012
Location: Glasgow, UK
Posts: 23
Rep Power: 14
Jaggy_Snake is on a distinguished road
Hi, sorry for the slow response.

- Yes it's the gnome terminal I'm using.
- By removing the previous installation, I deleted the Engys directory?
- I then downloaded Helyx-os and changed my bin folder to the new one you provided.

I've tried meshing my model to see if it has worked now I'm encountering another problems. I'm importing a Solidworks CAD file saved as an ASCII .STL and upon clicking 'create mesh' I'll get the following message:

Code:
--> FOAM FATAL ERROR:
unknown file extension STL. Supported extensions are '.ftr', '.stl', '.stlb', 'gts', '.obj', '.ac', '.off', '.nas' and '.tri'

          From function triSurface::read(const fileName&, const word&)
          in file triSurface/triSurface.C at line 420.

FOAM exiting
Any idea why I'm getting this error? The file type is .STL? (unless there's a case issue whereby .STL =/= .stl ?)

Cheers


ps. What does 'Material Point' under the General Options tab mean?



[EDIT] OK back to the original problem, I think it has been solved using pgeremia's patch. I'm trying to mesh another geometry ('wigley hull' as found here) to verify if Helyx is working but I'm unable to get similar results as in the youtube tutorials. It appears to mesh the geometry surface, but I'm unable to visualise the mesh refinement - when I click 'surface with edges' I can only see the solid surface of my control volume...

It's possible that I'm just entering wrong parameters into Helyx... Is there somewhere I can download the Ahmed's body as .stl so I can follow the youtube video exactly?

Last edited by Jaggy_Snake; December 17, 2012 at 04:02.
Jaggy_Snake is offline   Reply With Quote

Old   December 17, 2012, 05:30
Default
  #73
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
Yes, you need to rename your ASCII STL file to .stl and re-import to Helyx-OS. Make sure you remove the previous geometry first (go to the Surfaces tree, select your STL geometry, right-click of the mouse> Remove).

The material point indicates the coordinates of a location inside the fluid domain to be meshed and kept.
pgeremia is offline   Reply With Quote

Old   December 17, 2012, 09:20
Default
  #74
New Member
 
Fergus
Join Date: Sep 2012
Location: Glasgow, UK
Posts: 23
Rep Power: 14
Jaggy_Snake is on a distinguished road
Ok, it likes my .stl and the mesher says it has ended, but I can't see any mesh refinement and the 'case setup' menu is still all greyed over.

I'm sure it's just my set up of the refinement properties, but I've played around quite a bit and can't seem to get any useful mesh out of it.








Any ideas?

Last edited by Jaggy_Snake; December 17, 2012 at 10:23.
Jaggy_Snake is offline   Reply With Quote

Old   December 17, 2012, 10:25
Default
  #75
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
Your settings are fine. Now you need to re-open the case to load the mesh just created into Helyx-OS and thus enable Case Setup tab.
pgeremia is offline   Reply With Quote

Old   December 17, 2012, 10:37
Default
  #76
New Member
 
Fergus
Join Date: Sep 2012
Location: Glasgow, UK
Posts: 23
Rep Power: 14
Jaggy_Snake is on a distinguished road
Phew, I've got a mesh finally! I thought I was going to go crazy just there...

Thanks for your patience, Paulo.
Jaggy_Snake is offline   Reply With Quote

Old   March 4, 2013, 22:02
Default
  #77
Senior Member
 
JR22's Avatar
 
Jose Rey
Join Date: Oct 2012
Posts: 134
Rep Power: 18
JR22 will become famous soon enough
Can this be a feature request?. Thanks

Quote:
Originally Posted by chegdan View Post
HelyxOS currently removes extra entries in the controlDict (e.g. libs( "libSomethingSomething.so" ) and function objects ) by design when you save and run a case.
JR22 is offline   Reply With Quote

Old   March 5, 2013, 03:22
Default
  #78
New Member
 
Paolo Geremia
Join Date: Aug 2012
Posts: 11
Rep Power: 14
pgeremia is on a distinguished road
Sure thanks, we will add this to our wish list.
pgeremia is offline   Reply With Quote

Old   June 26, 2013, 13:33
Default Hi Problem with HelyxOS
  #79
Member
 
Rahul
Join Date: Jun 2013
Location: Pennsylvania, USA
Posts: 31
Rep Power: 13
rrr311 is on a distinguished road
Send a message via AIM to rrr311 Send a message via Skype™ to rrr311
I managed to install HelyxOS but when i try to run it, it shows the following error. HelyxOS starts but the right hand column is missing and says VTK library missing. I also did the libmpi.so.1 command as mentioned but still doesn't solve the problem. The error also shows certain paths as found:not:command:

for example:

/home/suse/OpenFOAM/ThirdParty-2.1.x/platforms/linux64Gcc46DPOpt/lib/openmpi-system:found:not:command:



Quote:
java -Xms128m -Xmx1024m -XX:OnError="/home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/bin/collectInfo.run" -jar /home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/lib/HelyxOS.jar HelyxOS 2>&1 | tee /home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/helyxEE.log
vtkHybridJava NOT loaded: /home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/ext/libvtkHybridJava.so.5.10.0: libmpi.so.1: cannot open shared object file: No such file or directory
java.lang.UnsatisfiedLinkError: /home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/ext/libvtkHybridJava.so.5.10.0: libmpi.so.1: cannot open shared object file: No such file or directory
at java.lang.ClassLoader$NativeLibrary.load(Native Method)
at java.lang.ClassLoader.loadLibrary1(ClassLoader.jav a:1939)
at java.lang.ClassLoader.loadLibrary0(ClassLoader.jav a:1864)
at java.lang.ClassLoader.loadLibrary(ClassLoader.java :1854)
at java.lang.Runtime.loadLibrary0(Runtime.java:845)
at java.lang.System.loadLibrary(System.java:1084)
at eu.engys.helyx.vtk.VTKUtil.loadLibrary(VTKUtil.jav a:94)
at eu.engys.helyx.vtk.VTKUtil.LoadAllNativeLibraries( VTKUtil.java:70)
at eu.engys.helyx.gui.Launcher.main(Launcher.java:43)
Make sure the search path is correct:
/home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/ext:/home/suse/OpenFOAM/Engys/HelyxOS/v1.0.2/../jre/lib/amd64/xawt:/home/suse/OpenFOAM/ThirdParty-2.1.x/platforms/linux64Gcc46/paraview-3.12.0/lib/paraview-3.12:/home/suse/OpenFOAM/OpenFOAM-2.1.x/platforms/linux64Gcc46DPOpt/lib/openmpi-system:/home/suse/OpenFOAM/ThirdParty-2.1.x/platforms/linux64Gcc46DPOpt/lib/openmpi-system:found:not:command:mpicc:/home/suse/OpenFOAM/suse-2.1.x/platforms/linux64Gcc46DPOpt/lib:/home/suse/OpenFOAM/site/2.1.x/platforms/linux64Gcc46DPOpt/lib:/home/suse/OpenFOAM/OpenFOAM-2.1.x/platforms/linux64Gcc46DPOpt/lib:/home/suse/OpenFOAM/ThirdParty-2.1.x/platforms/linux64Gcc46DPOpt/lib:/home/suse/OpenFOAM/OpenFOAM-2.1.x/platforms/linux64Gcc46DPOpt/lib/dummy:found:not:command:mpicc:bash:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib

Please can you guys help me out. Thank you in advance.
rrr311 is offline   Reply With Quote

Old   June 26, 2013, 13:43
Default
  #80
Senior Member
 
Daniel P. Combest
Join Date: Mar 2009
Location: St. Louis, USA
Posts: 621
Rep Power: 0
chegdan will become famous soon enoughchegdan will become famous soon enough
Remember, HELYX-OS v1.0.2 is made to work with OpenFOAM-2.2.x.

I see that your error massage made reference to ThirdParty-2.1.x. If you would like to continue to use 2.1.x and HELYX-OS then you should download the previous version with this link.
chegdan is offline   Reply With Quote

Reply

Tags
cases setup, preprocessor, snappyhexmesh


Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are On
Refbacks are On


Similar Threads
Thread Thread Starter Forum Replies Last Post
Helyx-OS Open Source GUI for OpenFOAM eugene OpenFOAM Announcements from Other Sources 31 March 9, 2020 17:55
TUI Commands from GUI? Carlos FLUENT 6 May 22, 2013 19:05
User Defined GUI Frederik FLUENT 0 June 23, 2006 17:12
Command Line vs. GUI Menus Go FLUENT 0 June 8, 2005 17:05
GUI window settings cmv Siemens 0 February 7, 2005 07:22


All times are GMT -4. The time now is 19:07.